| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5280 |
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| Symbol | |
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| ID | 8329482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6279810 |
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| End bp | 6281531 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945719 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_003102947 |
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| Protein GI | 256379287 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.135801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGCA CGTACGGCCT GGTCGCCGTG CTGCTGGTGG TGCTGGGCAC GATGCTGGTC
GGCGGGTACG GGCTGCGGGT GTCGCGGACG ACGTCGGACT TCTTCGTGGC GTCCCGGACC
GTGTCCCCGT GGTGGAACGC CTCGGCGATC GGCGGCGAGT ACCTGTCGGC GGCGTCGTTC
GTGGGCATCG CGGGGCTGGT GTTCGCGCAC GGGCCGGACA TGCTGTGGTT CCCGGTCGGC
TACGCGGCGG GCTACCTGGT GCTGCTGGCG CTGGTCGCGG CCCCGCTCAG GCGCAGCGGC
GCGTACACGC TGCCGGACTT CGCGGAGGCC CGGTTCGGCT CGCCGGTGGT GCGGGCGGTG
GCGTCGGGGC TGGCGCTGGG CATCGGGTGG CTGTACCTGC TGCCGCAGTT CCAGGGCGCG
GGGCTGACCC TGCACACGGT CATCGGCACG CCGAGCTGGG TGGGCGCGGC GATGGTGGCG
GTGGTGGTGA CGGCGAACGT GCTGTCCGGC GGGATGCGCA GCGTGACGTT CGTGCAGGCG
TTCCAGTACT GGCTCAAGCT GACCGCGATC GCGGTGCCCG CGGTGTTCCT GGTGCTGGCG
TGGCAGGCGC AGGGCGCGCG GGGCGTGTCG ACGGAGGACT TCCCGGTGTT CCCGCGCGAG
ACGTCGGTGT CGTTCGAGCG GACGACGGTG GTCGACGTGC GGGAGCCGGT CGGGTTCAGC
GGCGCGGGCG AGGTCGACGG CGAGCGGGTG GACGGGCTGG TGCTGCTGGA GGGCGGCGAG
CACACCATCG CGGCCGGGTC GCGGCTGGTG TTCCCGCAGG GGGCCGCGGT GCCGCACCTG
AAGTCGATCC CGCAGACCAC CGGGGCGGGC TGGTCGCTGC CCAGCAGCGG CGTGGAGCGG
TTCGGGCTGT ACTCGGTGTA CTCGCTGATC ATCGCGACGT TCCTGGGCAC GATGGGGCTG
CCGCACGTGA TCGTGCGCTT CTACACCAAC CCGAACGGCC GGGCGGCGCG GCGCACCACG
CTGATCGTGC TGGGGCTGCT GGGCGTGTTC TACCTGATGC CGCCGCTGTA CGGGGCGCTC
GGGCGGTTGT ACACGCCGGA GCTGCTGATG ACCGGGGACA CCGACGCGGT GGTGCTGGTG
CTGCCGAGCC GGGTCGTCGG CGGGCTCGGC GGGCAGCTGC TGGGGGCGCT CGTGGCGGGC
GGGGCGGTGG CGGCGTTCCT GTCGACCTCG TCGGGGTTGA TCGTGTCGCT GGCCGGGGTG
CTGAGCCGGG ACGTGCTGCG GTTGCGCGGG GTGCGCGGGT TCCGGCTGGC GACGCTGGTG
GCGGTGACCG CGCCGCTGCT GGTGACGCCG CTGCTGGGGC GGGTGCCGGT GGCGGACGTG
GTGGGGCTGG CGTTCGCGGT GGCGGCGTCG TCGCTGTGCC CGCTGCTGGT GCTGGGGATC
TGGAGCACGC GGATCACGAC GGTCGGCGCG GTCGCCGGGA TGCTCGCGGG CGGGGTCCCG
GCGCTGGCGG CCGGGATGGT GACGATCGCG GCGGGACCGA GCGACGCCTG GTACCACGCG
CTCCTGGCGC GCCCGGCGGC GTGGACGGCG CCGCTGGGGT TCGTGGTCAT GTACGCGGTG
TCGCTGGCGA CGCCGAAGCG GGTGCCACCG GGGGTGAACC ACGTGATGGT GCGGTTGCAC
GCGCCGGAGA ACCTGGGACT GCGCAGTCAG GACCGGTTGT GA
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| Protein sequence | MSSTYGLVAV LLVVLGTMLV GGYGLRVSRT TSDFFVASRT VSPWWNASAI GGEYLSAASF
VGIAGLVFAH GPDMLWFPVG YAAGYLVLLA LVAAPLRRSG AYTLPDFAEA RFGSPVVRAV
ASGLALGIGW LYLLPQFQGA GLTLHTVIGT PSWVGAAMVA VVVTANVLSG GMRSVTFVQA
FQYWLKLTAI AVPAVFLVLA WQAQGARGVS TEDFPVFPRE TSVSFERTTV VDVREPVGFS
GAGEVDGERV DGLVLLEGGE HTIAAGSRLV FPQGAAVPHL KSIPQTTGAG WSLPSSGVER
FGLYSVYSLI IATFLGTMGL PHVIVRFYTN PNGRAARRTT LIVLGLLGVF YLMPPLYGAL
GRLYTPELLM TGDTDAVVLV LPSRVVGGLG GQLLGALVAG GAVAAFLSTS SGLIVSLAGV
LSRDVLRLRG VRGFRLATLV AVTAPLLVTP LLGRVPVADV VGLAFAVAAS SLCPLLVLGI
WSTRITTVGA VAGMLAGGVP ALAAGMVTIA AGPSDAWYHA LLARPAAWTA PLGFVVMYAV
SLATPKRVPP GVNHVMVRLH APENLGLRSQ DRL
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