| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5278 |
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| Symbol | |
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| ID | 8329480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6278537 |
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| End bp | 6279382 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945717 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003102945 |
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| Protein GI | 256379285 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.415246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAG GTCTGCCCTG TCCTCTGTGC GAGGGGCCCG AACGCCGGGG GGCGCTCGGG
CGGCCGTTGC GGGTGCTCGC CGTGGACGAC GAGCCGCCCG CGCTGGAGGA CCTCGTCTAC
CTGCTGCGGT CCGATCCGAG GGTCGGGCAC GTGGAGGCGG TCGGGGACGC GACCAAGGCG
CTGCGCACGC TGCACCGGGC CATGGACGCG GGGCAGCCGG TCGACGCGGT GTTCCTGGAC
ATCCGGATGC CGGGCCTGGA CGGGTTGGAC CTGGCGCGGG TGCTGTCCCG GTTCGCGCAG
CCGCCGCCCA TCGTGTTCGT GACCGCGCAC CAGGAGCCGG CGGTGGAGGC GTTCGAGCTG
AAGGCGCTCG ACTACCTGCT GAAACCGGTG CGGCAGGAGC GGTTGGCCGA GTCGGTGCAC
CGGATCGTGC ACGAGGTGCT GGAGAGCAGG CCGGTCGAGC AGCCCGCGCC GCAGGCCGCG
CCGGTCGAGC GGGCGCCGGA CGTGGGCGAC GAGGTCATCC CGGTGGAGCT GGGCGGGATC
ACCCGGTTCA TCCGGCTCGC GGAGATCCGC TACGTGGAGG CGCACGGCGA CTACGCGCGG
CTGCACACGG CGACCGGCAG CGGGCTGGTG CGGGCGGCGC TGAACGGGCT GGAGGAGCGC
TGGCGCAGCG CCGGGTTCGT GCGCATCCAC CGCAGCCACC TGGTGTCGCT CGGGCACATC
GACGAGCTGC GGCTGGAGGA CGGGCACCTG AGCGTGAACA TCGGGGGGGC GGTGCTGCCG
GTGAGCAGGC GGCACGCCCG GCACCTGCGG CAGCTCCTGG TGCGGCGCAA CCGGCAGCCG
TCGTGA
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| Protein sequence | MTSGLPCPLC EGPERRGALG RPLRVLAVDD EPPALEDLVY LLRSDPRVGH VEAVGDATKA
LRTLHRAMDA GQPVDAVFLD IRMPGLDGLD LARVLSRFAQ PPPIVFVTAH QEPAVEAFEL
KALDYLLKPV RQERLAESVH RIVHEVLESR PVEQPAPQAA PVERAPDVGD EVIPVELGGI
TRFIRLAEIR YVEAHGDYAR LHTATGSGLV RAALNGLEER WRSAGFVRIH RSHLVSLGHI
DELRLEDGHL SVNIGGAVLP VSRRHARHLR QLLVRRNRQP S
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