| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5260 |
|---|
| Symbol | |
|---|
| ID | 8329462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 6257343 |
|---|
| End bp | 6258641 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644945699 |
|---|
| Product | Protein-N(pi)-phosphohistidine-- sugarphosphotran sferase |
|---|
| Protein accession | YP_003102927 |
|---|
| Protein GI | 256379267 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA GCGCCCCACA GGCGACGGGC GGTCGTGAGA TCAAGGGACT GGCCGGGTTG
CAGAGGTTCG GCCGCAGCTT GATGCTGCCG ATCGCCGCGC TCCCCGTCGC CGGCCTGCTG
CTCCGCCTCG GCCAGCCCGA CCTGCTCGGC GCCGACGGCC TGGGCTGGAT CCAGGTCGCC
GCCGTCATCG GCGGCGCGGG CGACGCGCTG TTCACCAACC TGCCGCTGCT GTTCGCGGTG
GGCGTGGCGA TCGGCTTCGC CCGACGCGGC GACGGCTCCA CCGCGCTGGC CTCGGTGGTC
GGCTACGTGG TGATCCAGGC CGTCTTCAAG GCGATGTCGC CGTTCGTGCT GGACCAGCCG
AACCCCGACA AGCCGGTGTT GATCAACTAC TCGGTGCTGG CGGGCGTGAT CGTGGGTCTG
ATCACAGCCG TGCTGTGGCA GCGGTACCAC CGCATCAAGC TCCCCCCGTA CCTGGCGTTC
TTCGGCGGCA GGCGGTTCGT GCCGATCCTG GTCGCGGGCG TCATGGTGGT CCTGGGCGTG
CTGCTCGGCC TGGTGTACCC GCTGTTCAAC GCTGGCCTGA CCTGGCTCGG CGAGGCCGTG
TCCAGCAGCA CCATCCTGGG CGCGGGCATC TACGGCACGG TCAACCGGCT GCTGATCCCG
CTGGGCCTGC ACCACATCCC GAACACCTTC GTCTGGCAGG TCTTCGGGGA GTACGAGGGC
AAGACCGGCG ACATCCAGCG GTTCTTCGCG GGCGACCCGA CGGCGGGCAC GTTCCAGACC
GGCTTCTTCC CGATCTTCAT GTTCGCGCTC CCGGCCGCCG CGCTGGCGAT CGTGCACACC
GCCCGACCGG CGCAGAAGAA GGTCGTCGCG GGCATCATGG GCTCGGCCGC GCTGACCGCG
TTCATCACCG GCGTCACGGA GCCGCTGGAG TTCGCGTTCA TGTTCGTCGC CTGGCCGCTG
TACCTGATCC ACGCGGTGCT CACCGGCACC TCGATGGCGA TCAGCAACGC GCTCGGCATC
CGCGACGGCT TCTCGTTCTC GGCGGGCGCG ATCGACTACG CGCTGAACTT CAACATCGCC
GAGAAGCCGC TGCTGATCAT CGTGCTGGGC CTGGTCTACG CGGTGGTGTA CTACTTCCTG
TTCCGCTTCG TCATCACGAA GTGGAACCTG CGGACGCCGG GCCGGGACGA GGACGAGGAC
CCCGAGGCCG ACCCGAGCGT CGTCGAGGGC GCCAGGCCCG AGGGCAGGAC CGAGCAGGAC
GGGACCCGCA GGACCAAGAA CCGGCCCGAG CGGTCCTAG
|
|---|
| Protein sequence | MSASAPQATG GREIKGLAGL QRFGRSLMLP IAALPVAGLL LRLGQPDLLG ADGLGWIQVA
AVIGGAGDAL FTNLPLLFAV GVAIGFARRG DGSTALASVV GYVVIQAVFK AMSPFVLDQP
NPDKPVLINY SVLAGVIVGL ITAVLWQRYH RIKLPPYLAF FGGRRFVPIL VAGVMVVLGV
LLGLVYPLFN AGLTWLGEAV SSSTILGAGI YGTVNRLLIP LGLHHIPNTF VWQVFGEYEG
KTGDIQRFFA GDPTAGTFQT GFFPIFMFAL PAAALAIVHT ARPAQKKVVA GIMGSAALTA
FITGVTEPLE FAFMFVAWPL YLIHAVLTGT SMAISNALGI RDGFSFSAGA IDYALNFNIA
EKPLLIIVLG LVYAVVYYFL FRFVITKWNL RTPGRDEDED PEADPSVVEG ARPEGRTEQD
GTRRTKNRPE RS
|
|---|
| |