Gene Amir_5256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5256 
Symbol 
ID8329458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6254941 
End bp6255525 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID644945695 
Productpeptidase A24A prepilin type IV 
Protein accessionYP_003102923 
Protein GI256379263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.652465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTCC ACCTGACCTA CCTGGGTTTC CTGGCCGGCC TCCTGACCGC TCCCACCCTG 
CGCCGCCTAC GTCGCGGAAC AAACGCCCCG TGGTGGTGGT GCGCTCCGCC AACAGCATTC 
CTGTGGTCCC TAACCGGAGC CCTGAACGTC CCCCCGAACT GGCTCCCCAT TCCCCTGACC 
CTGGCCTGGC TGGGCGTAGC CCTGACGGTG GTGGACCTAC GCCACCGCAG ACTCCCGAAC 
GCCCTCACCC TCCCCGCCTA CCCGGTCCTC TTCCTGCTCC TGCTCATGTC AGGCGCAGAC 
CCACTGCGCG CCCTGGCCGG CTGCACCCTG TTCGGCGGCC TGCACCTGCT CATCCACCTG 
CTGCGCCCAA CCGCCCTGGG CGGAGGCGAC GTGAAACTGT CAGCCCCGCT AGGCGCAGTC 
CTGGCCTGCG TCTCCTGGTC CGCACTCCCA CTGGCAACCG CCCTGGCCAG CCTGACCACC 
GTCCTCCTCT CCCGCCTCCC TTCCCGCAAA CACCCACCCT GGTCCCTCCC CCACGGCCCA 
GGCCTGCTGG GCTCAACGTG GCTGCTCTCC GTCGTGGCGG TGTAG
 
Protein sequence
MTFHLTYLGF LAGLLTAPTL RRLRRGTNAP WWWCAPPTAF LWSLTGALNV PPNWLPIPLT 
LAWLGVALTV VDLRHRRLPN ALTLPAYPVL FLLLLMSGAD PLRALAGCTL FGGLHLLIHL 
LRPTALGGGD VKLSAPLGAV LACVSWSALP LATALASLTT VLLSRLPSRK HPPWSLPHGP 
GLLGSTWLLS VVAV