Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5253 |
Symbol | aroB |
ID | 8329455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6250219 |
End bp | 6251325 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945692 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_003102920 |
Protein GI | 256379260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.528317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAGC CGGTGCGCAT CCGCGTGGCC GCGGAGCGGC CGTACGAGGT CATCGTCGGG CGTGGGTTGC TCGGGGACCT GGTCGAACTG CTGCGCGGCA CCTCGAAGGC GGCGATCGTG CACACCGCCG TGCTCGCCGA GACGGCGGAC GCGGTGCTCG AGGAGTTGCG CGGGGCCGGG GTCGACGCGC ACCGGGTCGA GGTGCCCGAC GCCGAGGACG GCAAGGACCT GCGGGTCGCC GGGTACTGCT GGGACGTGTT CGGGCAGATC GGGCTCGGGC GGCAGGACGT CGTCGTCGGG CTCGGCGGCG GGGCGGTCAC CGATCTCGCC GGGTTCGTCG CGTCCACCTG GATGCGCGGG GTGCGGCTGA TCAACGTGCC GACCACGCTC CTCGGCATGG TCGACGCCGC CGTGGGCGGC AAGACCGGCA TCAACACCGA CGCGGGCAAG AACCTCGTCG GCACCTTCTA CGAGCCGACC GCCGTCCTGG CCGACCTCAC CACCCTGGAG ACCCTGCCGC GCAACGAGCT CGTCGCGGGC ATGGCCGAGG TGGTCAAGGG CGGCTTCATC GCCGACCCGG CGATCCTCGA CCTCATCGAG GCCGACCCGG CCGCCGCGCT CGACCCGTCC GGCGACGTGC TCGCCGAGCT GGTCCGCCGC AAGATCCAGG TCAAGGCCGA CGTGGTGTCC AGCGACCTGC GCGAGTCGAA CCTGCGCGAG ATCCTCAACT ACGGCCACAC CCTCGGCCAC GCCCTGGAGC GCCGCGAGCG CTACCGCTGG CGCCACGGCG CGGCCATCAG CGTCGGCCTG GTCTTCGCCG CCGAGCTCGC CCGCCTGGCG GGCAGGCTGG ACGACGCCAC CGCCGACCGC CACCGCAGCG TCCTCACCTC GCTCGGCCTC CCCGTGGCCT ACGACCCGGA CGCCCTGCCG CAGCTGCTGG AGGGGATGCG CTCGGACAAG AAGAACCGCT CGGGCGTGCT CCGCTTCGTC GTGCTCGACG GCCTGGCCAA GCCGGGCAGG CTCGAAGGCC CCGACCCGTC GCTGATCGCC GCCGCCTACT CGGCCGTCGC GGCCGAGCCG AGGACCGGCG GGAGCATCCT GCTGTGA
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Protein sequence | MGEPVRIRVA AERPYEVIVG RGLLGDLVEL LRGTSKAAIV HTAVLAETAD AVLEELRGAG VDAHRVEVPD AEDGKDLRVA GYCWDVFGQI GLGRQDVVVG LGGGAVTDLA GFVASTWMRG VRLINVPTTL LGMVDAAVGG KTGINTDAGK NLVGTFYEPT AVLADLTTLE TLPRNELVAG MAEVVKGGFI ADPAILDLIE ADPAAALDPS GDVLAELVRR KIQVKADVVS SDLRESNLRE ILNYGHTLGH ALERRERYRW RHGAAISVGL VFAAELARLA GRLDDATADR HRSVLTSLGL PVAYDPDALP QLLEGMRSDK KNRSGVLRFV VLDGLAKPGR LEGPDPSLIA AAYSAVAAEP RTGGSILL
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