Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5247 |
Symbol | |
ID | 8329449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6244286 |
End bp | 6244774 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644945686 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003102914 |
Protein GI | 256379254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.819669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGACT ACGCCAAGGC GCTGGGGGCA AAGCTCCGCG CGATCCGCCA GCAGCAGGGC CTCTCGTTGC ACGGCGTCGA GCAGAAGTCC GGTGGCCGCT GGAAGGCCGT GGTGGTGGGC TCGTACGAGC GCGGCGACCG TGCCGTGACC GTCCAGAAGC TCGCCGAGCT GGCCGACTTC TACGGCGTCC CGGTTGCCGA GCTGCTCCCG GAGGGTCGCG TGCCGTCGGG CGCGGAACCC GCCACCAAGA TCGTGATCAA CCTGGAGCGG TTGCAGCAGC TGCCCGCCGA GAAGGTCGGT CCGCTCGCCA GGTACGCGGC GACCATCCAG AGCCAGCGCG GCGACTACAA CGGCAAGGTG CTGTCGATCC GCACCGAGGA CCTGCGCTCG CTCGCGATCA TCTACGACAT GACTCCCGGA GAGCTGACCG AGCAGCTCAT CGACTGGGGT GTGCTGCCTC CCGAGGCCAG GCCGTCCAAG GAGGACTAG
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Protein sequence | MGDYAKALGA KLRAIRQQQG LSLHGVEQKS GGRWKAVVVG SYERGDRAVT VQKLAELADF YGVPVAELLP EGRVPSGAEP ATKIVINLER LQQLPAEKVG PLARYAATIQ SQRGDYNGKV LSIRTEDLRS LAIIYDMTPG ELTEQLIDWG VLPPEARPSK ED
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