Gene Amir_5220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5220 
Symbol 
ID8329422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6215763 
End bp6216413 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID644945659 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003102887 
Protein GI256379227 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0238745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCCC CCAGCATCCT GTCCGCCGAC TTCGCGCGCC TGGCGGACGA GGCCGCCGCC 
GTTTCCGGCG CCGACTGGCT GCACGTCGAC GTCATGGACG CGCACTTCGT GCCGAACCTG 
ACCCTCGGCC TGCCGGTGGT GAAGTCGCTG CGCAAGGCCA CCGACATCCC CCTCGACTGC 
CACCTCATGA TCGAGGACCC GGACCGCTGG GCGATCGGCT ACGCCGAGGC GGGCGCCCAC 
AACGTCACCG TGCACGCCGA GGCCGCCGCC GACCCGGTCA AGCTCGCCAA GGACCTGCGC 
GCCGCCGGGT CCAGGGCCGG CCTGTCGATC AAGCCCGGCA CCAGCCTCGA CTCGGTCGTC 
GACGTGCTCA AGCACTACGA CACCCTCCTG GTGATGTCCG TCGAGCCCGG CTTCGGCGGC 
CAGAGCTTCA TGCCCGAGGT GCTCGACAAG GTCCGCACCG CCCGGAACCT GGTCGACACC 
GGCCACCTCA AGCTGGTCAT CGAGATCGAC GGCGGCATCA ACGCCGACAC CATCGCGCAG 
GCCGCCGAGG CGGGCGTCGA CTGCTTCGTC TCGGGCTCCG CCGTCTACGA CGCCGCCGAC 
CCGGCGAAGG CCCTGGAGTC CCTGCGCGGC CTGGCCGCAG CAGCCCGGTG A
 
Protein sequence
MIAPSILSAD FARLADEAAA VSGADWLHVD VMDAHFVPNL TLGLPVVKSL RKATDIPLDC 
HLMIEDPDRW AIGYAEAGAH NVTVHAEAAA DPVKLAKDLR AAGSRAGLSI KPGTSLDSVV 
DVLKHYDTLL VMSVEPGFGG QSFMPEVLDK VRTARNLVDT GHLKLVIEID GGINADTIAQ 
AAEAGVDCFV SGSAVYDAAD PAKALESLRG LAAAAR