Gene Amir_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5219 
Symbol 
ID8329421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6215017 
End bp6215655 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content73% 
IMG OID644945658 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_003102886 
Protein GI256379226 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0952881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCACCG GGATCGTGGA GGAGCTGGGC GAGGTCGTCG AGGTGACCGA CCTGCCGGAC 
GCGGCGCGCG TGACCATCTC TGGTCCGCTG GTGACCGGTG ACGCGAAGCA CGGCGACTCC 
ATCGCCGTGA ACGGCGTCTG CCTCACCGTC GTCGACGTCG TGGACGGCGC GTTCACCGCC 
GACGTCATGC GCGAGACCCT GGTCCGCTCC AGCCTGGCCA AGGTCGCGGG CGGCGACCGG 
GTCAACCTGG AGCGCGCCGC CGCCGTCGGC CAGCGCCTCG GCGGCCACAT CGTGCAGGGC 
CACGTGGACG GCACCGGCGT CGTGCTGTCC AGGGAGCCCT CCGAGCACTG GGAGCTGGTG 
CGCTTCTCCC TGCCCGCCAG GCTCGCCCGC TACCTCGTGG AGAAGGGCTC CATCACCGTC 
GACGGCGTGT CCCTGACCGT CGTGGACGTC ACCGCCGACT CGTTCAGCGT GAGCCTCATC 
CCGGCCACCC TGGAGGCCAC CACCCTCGGC CGCCGCCAGC CGGGCGACCC GGTGAACCTG 
GAGGTCGACG TGCTGGCCAA GTACGTCGAG AAGCTCGCCC TCCCGCACCT GCCCGCCGAG 
AGCGCCGGGA CCGCCGAGAG CGCCGGGACC GCCGGGTGA
 
Protein sequence
MFTGIVEELG EVVEVTDLPD AARVTISGPL VTGDAKHGDS IAVNGVCLTV VDVVDGAFTA 
DVMRETLVRS SLAKVAGGDR VNLERAAAVG QRLGGHIVQG HVDGTGVVLS REPSEHWELV 
RFSLPARLAR YLVEKGSITV DGVSLTVVDV TADSFSVSLI PATLEATTLG RRQPGDPVNL 
EVDVLAKYVE KLALPHLPAE SAGTAESAGT AG