Gene Amir_5217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5217 
Symbol 
ID8329419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6213288 
End bp6213770 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content77% 
IMG OID644945656 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_003102884 
Protein GI256379224 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0257788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG AGGGCCGTCC CGCCGCCGAG GTCCCGGACG CGGCGGGGCT CAGCCTCGCG 
GTCGTGGCGA CCCGGTGGCA CGGCAGGATC ACCGACCGGC TCGTGGAGCG GGCGGTGGCC 
GCCACCGAGC TGGCGGGCGC GACGGCGAGG ACGGTCGTGC GGGTCGCGGG CGCGGTGGAG 
CTGCCCGTCG TGGCGCAGGC GCTGGCCCGC ACCCACGACG CGGTCGTCGC GCTGGGCGTG 
GTCGTGCGGG GCGGGACCCC GCACTTCGAG TACGTGTGCG ACGCGGTCAC GGCCGGGTTG 
ACCAGGGTGG CGCTGGACGA GTCCACCCCG GTCGGCAACG GCGTGCTGAC CTGCGACACC 
GAGGAGCAGG CGGTGGCCAG GGCCGGGTTC GACGGCTCGG TCGAGGACAA GGGGCACGAG 
GCGGCGGTGG CCGCGCTGGA GGCGGCGCTG GTGCTGCGTG CCGTCAACGA GGGGTCAGGG 
TGA
 
Protein sequence
MSGEGRPAAE VPDAAGLSLA VVATRWHGRI TDRLVERAVA ATELAGATAR TVVRVAGAVE 
LPVVAQALAR THDAVVALGV VVRGGTPHFE YVCDAVTAGL TRVALDESTP VGNGVLTCDT 
EEQAVARAGF DGSVEDKGHE AAVAALEAAL VLRAVNEGSG