| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5214 |
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| Symbol | |
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| ID | 8329416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6210709 |
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| End bp | 6211206 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945653 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003102881 |
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| Protein GI | 256379221 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0117926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACGCG ACGAGGAGTT CACCCGGTTC TACACCGGGC ACTTCGATCA GGCCCGCCGC
ACCGCCTACG CGATGTGCGG CAACTGGTCG GACGCGGAGG AGATCACCCA GAACGCGTTC
GTGCGCGTGT ACTCCGCGTG GGCCAGGGTC CGCAGCGAGA CCGCCGAGGC GTACCTGCGC
ACGGTCGTGA CCAGGGTCTT CCTGGACACC CGGCGGCGCA GACGGGGCCG CGAGCAGGCC
GTGGCGGAGC CGCCCGAACG CCCGGTGCCC CCGGACACCG AGTCCGCCGA GCACCGCCAG
AACCTGATCC CCGCCCTGCA GGAGCTGCCG CCGCGCCAGC GCGCGGTGAT CGTGCTCCGG
TTCGTCCACG ACCTGTCCGT GGAGCAGGTG GCCCAGACCA TGGGCTGCAC GCAGGGCACG
GTCAAGAGCC AGACCTCGCG CGGCCTGGAG GCGCTCCGCC GCGCCTTCCC CCGCGCACAC
CCCAGGGAGC GCACGTGA
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| Protein sequence | MKRDEEFTRF YTGHFDQARR TAYAMCGNWS DAEEITQNAF VRVYSAWARV RSETAEAYLR
TVVTRVFLDT RRRRRGREQA VAEPPERPVP PDTESAEHRQ NLIPALQELP PRQRAVIVLR
FVHDLSVEQV AQTMGCTQGT VKSQTSRGLE ALRRAFPRAH PRERT
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