| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5212 |
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| Symbol | |
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| ID | 8329414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6208808 |
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| End bp | 6209761 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945651 |
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| Product | Helix-turn-helix type 11 domain protein |
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| Protein accession | YP_003102879 |
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| Protein GI | 256379219 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000701081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGGAGA CCTCCGCGCG TTTGCTCAGG CTGCTGTCGC TGCTCCAGGT CCGCCGCGAG
TGGAGCGGGC CGGAGCTGGC CGGGAGGCTC GGCGTCGGGG TGCGCACGGT GCGCCGCGAC
GTCGACAAGC TCCGGTCGCT CGGCTACCCG GTGTCCTCGC TGCCCGGCGC GGCGGGCGGC
TACCAGCTGG GCGCGGGTGC CGAGCTGCCG CCGCTGCTGC TGGACGACGA GGAGGCCGTC
GCGGTCGCCA TCGGCCTGCG CACGGCGGCG GGCGGCACGG TGCACGGCAT CGAGGAGAGC
TCGGTGCGGG CGCTGGCGAA GCTGGAGCAG GTGCTGCCGT CGCGGCTGCG CAGGCGGGTG
GCGGCGCTGC AGCGGCACAC CGTGTCGCTG GCCGCGCCCG CCGTGCGGGT GGACGCCAAC
GCGCTCGCGG TGATCGCCGG GGCCTGCCGG GACGCGCAGC GGCTGCGGTT CGGGTACCGG
GGCAAGGACG GGGCCGGGTC GCGTCGGCAC GTGGAGCCGT TCGGGCTGGC CCACACCGGG
TGGCGCTGGT ACCTGGTGGC GTGGGACGTG GACCGGGCGG ACTGGCGCAC GTTCCGGGTC
GACCGGTTCG AGGGCGAGCC CGCGCTGGGC GGGCGGTTCC CGCGCCGGGA GGCCCCGGCG
GAGGACCTGG TGGCGTACGT GTCGGAGCAG CTGGCGGTGG CCCCCTACGA GCACCGGGCC
GAGCTGGTGG TGCACGCGCC GCACGAGGAG GTCGCGGCGC GGGTGTCGCG GACCTCGGTG
AGCATCACGC CGATCGACGA GCGCACCACG CGGGTCGTGA TGGGGGCGTC GTCGGTGGTG
GAGCTGGGGA TGTGGGTGGG GGTGCTCGGG TTCGAGTTCA CGCTGGTGGG CTCGCCCGAG
CTCGCCCAGC ACCTGCGGGT GCTGGGCGAG CGGTTCGGCC GGGCGGTCGG CTGA
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| Protein sequence | MLETSARLLR LLSLLQVRRE WSGPELAGRL GVGVRTVRRD VDKLRSLGYP VSSLPGAAGG
YQLGAGAELP PLLLDDEEAV AVAIGLRTAA GGTVHGIEES SVRALAKLEQ VLPSRLRRRV
AALQRHTVSL AAPAVRVDAN ALAVIAGACR DAQRLRFGYR GKDGAGSRRH VEPFGLAHTG
WRWYLVAWDV DRADWRTFRV DRFEGEPALG GRFPRREAPA EDLVAYVSEQ LAVAPYEHRA
ELVVHAPHEE VAARVSRTSV SITPIDERTT RVVMGASSVV ELGMWVGVLG FEFTLVGSPE
LAQHLRVLGE RFGRAVG
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