Gene Amir_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5203 
Symbol 
ID8329405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6198662 
End bp6199648 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content76% 
IMG OID644945642 
Productprotein of unknown function DUF199 
Protein accessionYP_003102870 
Protein GI256379210 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00647] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATGA CGTCGGCGGT CAAGGACGAG CTGAGCAGGT TGGCCGTGTC CAAGACCTGC 
TGCCGCCGGG CGGAGGTGGC CTCGCTGCTG CGCTTCGCGG GCGGGCTGCA CATCGTGGGC
GGCCGGGTGG TGGTCGAGGC CGAGCTGGAC CTGGGGTCCA CGGCGCGGCG GCTGCGCAGG
GAGATCCACG AGCTGTACGG GCACCAGTCC GACGTCTTCA CGATCACCTC CAGCGGGCTG
CGCAAGGGGA CGCGGTTCGT GGTGCGCGTG GTCAAGGACG GCGAGGGCCT GGCCAGGCAG
ACCGGCCTGC TCGACCCGAG GGGGCGGCCC GTGCGCGGGC TGCCCGCGCC GGTGGTGTCC
GGCGGGGTGT GCGACGCCGA GGCGGCGTGG CGCGGCGCGT TCCTGGCCCA CGGCTCCCTC
ACCGAGCCGG GCCGCTCCTC GTCGCTGGAG GTGACCTGCC CCGGTCCCGA GGCGGCGCTG
GCGCTGGTCG GCGCGGCGCG GCGGATGGGC ATCGGGTCGA AGTCGCGGGA GGTGCGCGGC
GCGGAGCGGG TCGTCATCAG GGACGGCGAC GCCATCGGGG CGATGCTGAC CAGGCTCGGC
GCGCACGACA GCGTGCTGGC CTGGGAGGAG CGGCGGATGC GCCGCGAGGT GCGGGCCACC
GCGAACCGCC TGGCGAACTT CGACGACGCC AACCTGCGCC GCTCGGCGCG GGCGGCCGTC
GCGGCGGCGG CGCGGGTGCA GCGGGCGCTG GAGATCCTCG GGGCGGAGGC CCCGGACCAC
CTGGCGGCGG CCGGTCAGCT GCGGCTGGCG CACCGGCAGG CGTCGCTGGA GGAGCTGGGG
CAGCTGTCGG AGCCGCAGAT GACCAAGGAC GCGGTGGCCG GGCGGATCCG GCGGCTGCTG
GCCATGGCGG ACAAGCGGGC GCGCGACCTG GGGCTGCCGG ACACCGAGTC GGCGGTCACG
GCGGACATGC TGGAAGCCGA GGTGTGA
 
Protein sequence
MAMTSAVKDE LSRLAVSKTC CRRAEVASLL RFAGGLHIVG GRVVVEAELD LGSTARRLRR 
EIHELYGHQS DVFTITSSGL RKGTRFVVRV VKDGEGLARQ TGLLDPRGRP VRGLPAPVVS
GGVCDAEAAW RGAFLAHGSL TEPGRSSSLE VTCPGPEAAL ALVGAARRMG IGSKSREVRG
AERVVIRDGD AIGAMLTRLG AHDSVLAWEE RRMRREVRAT ANRLANFDDA NLRRSARAAV
AAAARVQRAL EILGAEAPDH LAAAGQLRLA HRQASLEELG QLSEPQMTKD AVAGRIRRLL
AMADKRARDL GLPDTESAVT ADMLEAEV