Gene Amir_5199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5199 
Symbol 
ID8329401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6194673 
End bp6195677 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID644945638 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003102866 
Protein GI256379206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.745562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTTC GCGTAGGTGT CAATGGTTTC GGCCGCATCG GCCGCAACTT CTGGCGCGCC 
GTTCAGGCCA GTGGTCACGA CATCGAGATC GTGGCCTTCA ACGACCTCGG TGACGTCAAC 
ACGATGGCTC ACCTGCTGAA GTACGACTCC ATCCTCGGGC GCCTCGACGC CGAGGTCGGC 
GTGAACGACG AGGGCATCGT CGTCGACGGC AAGACCATCA AGGCCCTCGC CGAGCGCGAC 
CCCGGCAAGC TGCCCTGGAA GGACCTCGGC GTCGACGTCG TCGTGGAGTC CACCGGCTTC 
TTCACCGACG CCACCACCGC CCGCAAGCAC GTGGACGAGG GCGGCGCCAA GAAGGTCATC 
ATCTCGGCCC CGGCCAAGAA CGAGGACCTC ACCGTCGTGT TCGGCGCCAA CGAGGGCCTC 
TACGACGGCA CCCAGACCGT CATCTCGAAC GCGTCCTGCA CCACCAACTG CCTCGCCCCG 
CTGGCGAAGG TGCTGCACGA CGAGTTCACC ATCGAGCGTG GCCTCATGAC CACGATCCAC 
GCGTACACGC AGGACCAGAA CCTGCAGGAC GCGCCGCACA ACGACCTGCG CCGCGCCCGC 
GCCGCCGCCC TGAACATCGT GCCCACCAGC ACCGGCGCCG CCAAGGCGAT CGGCCTGGTC 
CTGCCCGAGC TCAAGGGCAA GCTGGACGGC TACGCGCTGC GCGTGCCCGT GCCCACCGGC 
TCGGCCACCG ACCTGACCGT CACCGTGGGT CGCGAGACCA CCGTGGACGA GGTCAACGCC 
GCCTTCAAGA AGGCCGCCGA GGGCTCCCTC AAGGGCTACC TGCGCTACAA CACCGACCCG 
ATCGTGTCGG CCGACATCGT CACCGACCCG GCGTCCTGCA TCTACGACGC CCCGCTGACC 
AAGGTCATCG GCAACCAGGT CAAGGTCGTC GGCTGGTACG ACAACGAGTG GGGCTACTCC 
AACCGCCTCG TCGACCTCGT CAACCTGGTC GCCGGCAAGC TCTGA
 
Protein sequence
MTVRVGVNGF GRIGRNFWRA VQASGHDIEI VAFNDLGDVN TMAHLLKYDS ILGRLDAEVG 
VNDEGIVVDG KTIKALAERD PGKLPWKDLG VDVVVESTGF FTDATTARKH VDEGGAKKVI 
ISAPAKNEDL TVVFGANEGL YDGTQTVISN ASCTTNCLAP LAKVLHDEFT IERGLMTTIH 
AYTQDQNLQD APHNDLRRAR AAALNIVPTS TGAAKAIGLV LPELKGKLDG YALRVPVPTG 
SATDLTVTVG RETTVDEVNA AFKKAAEGSL KGYLRYNTDP IVSADIVTDP ASCIYDAPLT 
KVIGNQVKVV GWYDNEWGYS NRLVDLVNLV AGKL