| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5190 |
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| Symbol | |
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| ID | 8329392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6185493 |
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| End bp | 6186632 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945629 |
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| Product | OpcA protein |
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| Protein accession | YP_003102857 |
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| Protein GI | 256379197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
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| TIGRFAM ID | [TIGR00534] opcA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.800269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCATCG ACCTGCCCTC GACGACCACG TCTCAGGTCA ACTCGAAGCT CGTGCAGCTG
CGCGAGGAGG GTGGCGCGGT CACCCTCGGC CGGGTGCTGA CGCTGGTCAT CGTGACCGAC
GACGGCAGCA AGACCGAGGA GGCCGTGGAG GCCGCGAACG ACGCCAGCCG CGAGCACCCG
TGCCGGGTGA TCGTGGTGGC GCGCGGCGCC CGCCAGGCCG CCGCGCGGCT GGACGCGCAG
ATCCGGGTCG GCGGTGACGC GGGCGCCTCC GAGGTGATCG TGCTGCGGCT GTACGGGCCG
CTCGCGTCCG AGGGCGCCTC GTGCGTGGTG CCGCTGCTGC TGCCGGACAC CCCGGTGGTG
GCGTGGTGGC CGAACGAGGC CCCGTCGTCG CCGTCGAAGG ACCCGATCGG GCAGCTCGCG
CAGCGCCGGA TCACCGACTC GGCGGCCGAG AAGAACCCGA TCAAGGCGCT GGAGCAGCGC
CGGTCGTCCT ACGCGCCCGG TGACACGGAC CTGGCGTGGA CGCGGCTGAC GCTGTGGCGG
GCGATGCTCG CCTCGGCGCT GGACCTGCCG CCGTTCGAGG CGATCACCGA GGCCGAGGTC
AGCGGCGAGG CCGACTCGCC GTCGACCGAC CTGCTCTCGG CGTGGCTCGC GGCGTACCTG
AAGGTGCCGG TGAAGCGGGT CAAGGCCACC AAGGGCCAGG GCATCGTGGA CGTGCGGCTG
GACCGGCCCT CCGGGTCGGT GGAGCTGGTG CGGCCGGACG GCTCGGTCGG CACGCTGACC
CAGCCGGGGC AGCCGCAGCG CCGGGTGGCG CTGCAGCGCC GGTCGGTGCG GGACTGCCTG
GCCGAGGAGC TGCGCAGGCT CGACCCGGAC GAGGTGTACG AGGCGGCGCT GCGGTCGCTG
GCGAAGGTGG CGCGCACCAA GCCCGCCGCG AAGCCGGTGG CGCGCAAGGC CGACGCGGCG
CCCGCCGTCG AGTCGGCGCC CGCCGTGGAG CCCGCCCCGG CCCCGGAGTC GGACGCGGTG
GAGACCCTGG CCGAGCCGCT GGGCTCCGAG GGGGCCGACA CCCCCGAGGC GGTCAAGCCG
AAGGCCAAGG CCGCCAAGGC GCCGAAGTCG GCCGTGCGCG CGGCGAAGGC GGGCTCGTGA
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| Protein sequence | MIIDLPSTTT SQVNSKLVQL REEGGAVTLG RVLTLVIVTD DGSKTEEAVE AANDASREHP
CRVIVVARGA RQAAARLDAQ IRVGGDAGAS EVIVLRLYGP LASEGASCVV PLLLPDTPVV
AWWPNEAPSS PSKDPIGQLA QRRITDSAAE KNPIKALEQR RSSYAPGDTD LAWTRLTLWR
AMLASALDLP PFEAITEAEV SGEADSPSTD LLSAWLAAYL KVPVKRVKAT KGQGIVDVRL
DRPSGSVELV RPDGSVGTLT QPGQPQRRVA LQRRSVRDCL AEELRRLDPD EVYEAALRSL
AKVARTKPAA KPVARKADAA PAVESAPAVE PAPAPESDAV ETLAEPLGSE GADTPEAVKP
KAKAAKAPKS AVRAAKAGS
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