Gene Amir_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5188 
Symbol 
ID8329390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6182339 
End bp6183958 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content74% 
IMG OID644945627 
Productphosphoglucose isomerase (PGI) 
Protein accessionYP_003102855 
Protein GI256379195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGG TGATCTCCGT GGAGATCGTC CGGGCGCCGA ACGCGGAGCA GGTCGAGACC 
GTCGTGTCCG ACCTGCTCCG CGACGCGGCG CCCAGCAGGC TCGCCGCAGG GGACGCCACG
CTGTGGGGTC CCGAGGCCGA GCCCGAGGCG TCGATCCGAC TCGCCTGGAC GAAGCTGCAC
GAGACGTCCC GCCCGCTGCT GGCCGAGATC GCCGCGCTGC GCGCGGAGCT GCTGGCCGAG
GGCGTAGACC GGGTGGTCCT CGCGGGCATG GGCGGCTCCT CGCTCGCGCC CGAGGTGATC
ACCGGCACCG CCGGGGTCCC CCTGGTGGTG CTGGACACCA CCGACCCCGG CCAGGTGGTC
GAGGCGCTGG TGGAGAGCCC CGAGCGCTCG GTGCTCGTGG TGTCGTCCAA GTCCGGCGGC
ACGGTGGAGA CCGACAGCCA CCGGCGGATC TTCGAGGAGG CGTTCGCGGC TGCGGGCGTC
GACCCGAAGT CGCGCATCGT CGTGGTGACG GACCCCGGCT CGCCGCTGCA GAAGGCGTCC
GAGGAGGCCG GGTACCGCAA GGTGTTCCTG GCCGACCCGA ACGTCGGCGG TCGCTACTCG
GCGCTCACCG CGTTCGGCCT GGTCCCGTCG GGCCTGGCGG GCGTGGACGT CGAGAAGCTG
CTCGACGAGG CCGCCGCCGC CGCGCCGCTG GTGTTCGCCG ACTCGGCGGA CAACCCGGCC
GTGCAGCTCG CGGCCGTGCT GGGCGTGGCG CACGCGCACG GCGCGGAGAA GGTCGTCCTC
GCCGACACCG GCTCCGGCAT CTCGGGCCTC GGCGACTGGG CCGAGCAGCT CGTGGCCGAG
TCCACCGGCA AGAACAGCAC CGGCCTGCTG CCCGTCGTGG TGGAGGGCCC CGGCGCGCCC
GGTTTCGTGG ACGCGGGCTC CGACGCCACG ACCGTCGCGA TCGGCCCGGC CACCGGGTCG
TCCGCGCTCG CGGTCGAGGG CTCCCTCGGC GCCCAGTTCC TGCTGTGGGA GGTCGCCACC
GCGCTGGTGG GCCGGGTGCT CGGGATCAAC CCGTTCGACC AGCCCGACGT GGAGGCGGCG
AAGAAGGCGG CGCGCTCGCT GCTGGACGCC CCCGCGTCCG AGCCCGCGAC GCCCGCGTTC
ACCGACGGCC CGATCGAGGT GCACGTCTCC GGCGGCGACT GGCTGCCGAA GGACGCCAAG
ACGGTCGCGG AGGCGCTGCG CGCGCTGGTC GCAGCGGCCC CCGACAAGGG CTACCTGTCG
GTGCAGGCCT ACCTGGACCG GGTGAACGAC GCGTCGTTCG CGCTCAGCCG CGCCGAGCTG
GCCAAGCGCA CGCACCTGCA GACCACCTTC GGCTGGGGCC CGCGCTTCCT GCACTCGACC
GGCCAGTACC ACAAGGGCGG TCACCAGAAC GGCGTGTTCC TCCAGCTCAC GGGCGTGTCC
GACCAGGAGC TGGCCGTTCC CGGCCGCCCG TACGACCTGG CGACGCTCCA GCTGGCGCAG
GCCCTCGGCG ACGGGCAGGT GCTCGCCGAG CACGGCCGCC CGGTGCTGCG GCTGCACCTG
ACCGACCGGG TCGCGGGGCT CGCCCAGTTC GTGGAGGCCA TCCAGGAGGA CGGCTCGTGA
 
Protein sequence
MTEVISVEIV RAPNAEQVET VVSDLLRDAA PSRLAAGDAT LWGPEAEPEA SIRLAWTKLH 
ETSRPLLAEI AALRAELLAE GVDRVVLAGM GGSSLAPEVI TGTAGVPLVV LDTTDPGQVV
EALVESPERS VLVVSSKSGG TVETDSHRRI FEEAFAAAGV DPKSRIVVVT DPGSPLQKAS
EEAGYRKVFL ADPNVGGRYS ALTAFGLVPS GLAGVDVEKL LDEAAAAAPL VFADSADNPA
VQLAAVLGVA HAHGAEKVVL ADTGSGISGL GDWAEQLVAE STGKNSTGLL PVVVEGPGAP
GFVDAGSDAT TVAIGPATGS SALAVEGSLG AQFLLWEVAT ALVGRVLGIN PFDQPDVEAA
KKAARSLLDA PASEPATPAF TDGPIEVHVS GGDWLPKDAK TVAEALRALV AAAPDKGYLS
VQAYLDRVND ASFALSRAEL AKRTHLQTTF GWGPRFLHST GQYHKGGHQN GVFLQLTGVS
DQELAVPGRP YDLATLQLAQ ALGDGQVLAE HGRPVLRLHL TDRVAGLAQF VEAIQEDGS