| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5186 |
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| Symbol | |
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| ID | 8329388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6179098 |
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| End bp | 6181191 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945625 |
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| Product | transketolase |
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| Protein accession | YP_003102853 |
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| Protein GI | 256379193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.29233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGATG ACATCACCCG GCTGACCGAG GCCACCGTCC CCGCCGACTG GACCGCGCTC
GACAAGCGCG CCGTCGACAC CGCGCGTGTC CTCGCCGCCG ACGCCGTCCA GAAGGTCGGC
AACGGCCACC CCGGCACCGC GATGAGCCTC GCCCCCGTGG CCTACTCGCT GTTCCAGCGG
GTGATGCGCC ACGACCCGGC CGACGCCGAC TGGATCGGCC GCGACCGCTT CGTGCTGTCG
GCGGGTCACT CCAGCCTGAC GCTGTACATC CAGCTGTACC TGGCGGGCTA CGGCCTGGAG
CTGGACGACC TGAAGGCGCT GCGCACCTGG GGTTCCAAGA CCCCCGGCCA CCCGGAGCAC
CGCCACACCC CCGGTGTGGA GATCACCACC GGCCCGCTGG GCCAGGGCCT CGCCTCGGCC
GTGGGCATGG CGATGGCCGC CCGCCGCGAG CGCGGCCTGT TCGACCCGGA GGCCCCGGCG
GGCGAGAGCC CATTCGACCA CCAGGTCTAC GTGATCGCCT CCGACGGCGA CATCGAGGAG
GGCGTCACCT CCGAGGCCTC GTCGATCGCG GGCCACCAGC AGCTGGGCAA CCTCACGCTG
ATCTACGACG ACAACAAGAT CTCGATCGAG GACGACACCG CGATCGCGCT GTCCGAGGAC
ACCGCCAAGC GCTACGAGGC GTACGGCTGG CACGTGCAGG TCGTGGAGTC CGGCGAGAAC
ATCTCCGGCA TCCTGGCCGC GCTGGAGGCC GCCCGCGCCG AGACGGCCCG CCCGTCGCTG
GTCGTGCTGC GCACGATCAT CGGCTTCCCG GCGCCGAACA AGATGAACAC CGGCAAGATC
CACGGCTCCG CGCTGGGCGA CGCCGAGGTG GCCGAGGTCA AGAAGGCGCT GGGCTTCGAC
CCGGAGCAGA CCTTCGAGGT CTCGGACGAG GTGATCAACC ACACCCGCTC GGTCATCAAG
CGCGGTGAGG CCGCCAAGGC CGAGTGGCAG AAGTCCTTCG ACGCGTGGGC GGAGGCGAAC
CCGGAGCGCA AGGCGCTGCT GGACCGCCTG ATCGGCCGCG ACCTGCCCGA GGGCTGGACC
GACGCGCTGC CCGTGTGGGA GCCGGACGCC AAGGGCGTCG CGACCCGCAA GGCGTCCGGC
GACGTGCTGT CCGCGCTGGC CCCGGTCCTG CCGGAGCTGT GGGGCGGCTC GGCCGACCTG
GCCGAGTCGA ACAACACCAC GATGAAGGGC GCGGACTCGT TCGGCCCGGA GAGCTCCTCC
ACGAGCACGT GGAGCGCGAA CCCGTACGGC CGCACGCTGC ACTTCGGCAT CCGCGAGCAC
GCGATGGGCT CGATCCTCAA CGGCATCGCG CTGCACGGCC CGACCCGCCC GTACGGCGGC
ACGTTCCTGG TGTTCAGCGA CTACATGCGC CCGGCCGTGC GCCTGGCCGC GCTGATGAAG
TCCGCGGTCA CCTACGTGTG GACGCACGAC TCCATCGGCC TGGGCGAGGA CGGCCCGACG
CACCAGCCGA TCGAGCACCT GGCCGCGCTG CGCGCGATCC CCGGTCTCGC GGTGGTGCGC
CCCGGCGACG CCAACGAGAC CTCGGCGTCG TGGCGGGCCA TCATCGAGAA CCCGACCGGC
CCGGCCGGCC TCGCCCTGAC CAGGCAGAAC CTCCCGGTGC TCGAGGGCAC CAGGGAGAAG
GCCGCCGAGG GCGTCGCCAA GGGCGGCTAC GTGCTGGAGG ACGCCGCGAA CGGCGCTCCC
GAGGTCGTGC TGATCGCCAC CGGCTCCGAG CTGCAGATGG CGGTCGAGGC GCGGAAGGTC
CTGGAGGCCG ACGGCGTTGC AGCGCGTGTG GTGTCCATGC CGTGCGTCGA GTGGTTCGAC
GCCCAGGACG AGGCGTACCG CGAGTCGGTC ATCCCGTCCT CGGTGAAGGC GCGCGTCGTG
GTCGAGGCGG GCATCGCCCA GCCGTGGCAC CGGTTCACCG GCGACGCGGG CGAGATCGTC
TCGATCGAGC ACTTCGGCGC CTCCGCCGAC TACCAGACGC TGTTCCGCGA GTTCGGCTTC
ACGACCGAGA ACGTCGTGGC CGCCGCCCGC CGGTCGCTGG ACGCCACCCG CTGA
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| Protein sequence | MSDDITRLTE ATVPADWTAL DKRAVDTARV LAADAVQKVG NGHPGTAMSL APVAYSLFQR
VMRHDPADAD WIGRDRFVLS AGHSSLTLYI QLYLAGYGLE LDDLKALRTW GSKTPGHPEH
RHTPGVEITT GPLGQGLASA VGMAMAARRE RGLFDPEAPA GESPFDHQVY VIASDGDIEE
GVTSEASSIA GHQQLGNLTL IYDDNKISIE DDTAIALSED TAKRYEAYGW HVQVVESGEN
ISGILAALEA ARAETARPSL VVLRTIIGFP APNKMNTGKI HGSALGDAEV AEVKKALGFD
PEQTFEVSDE VINHTRSVIK RGEAAKAEWQ KSFDAWAEAN PERKALLDRL IGRDLPEGWT
DALPVWEPDA KGVATRKASG DVLSALAPVL PELWGGSADL AESNNTTMKG ADSFGPESSS
TSTWSANPYG RTLHFGIREH AMGSILNGIA LHGPTRPYGG TFLVFSDYMR PAVRLAALMK
SAVTYVWTHD SIGLGEDGPT HQPIEHLAAL RAIPGLAVVR PGDANETSAS WRAIIENPTG
PAGLALTRQN LPVLEGTREK AAEGVAKGGY VLEDAANGAP EVVLIATGSE LQMAVEARKV
LEADGVAARV VSMPCVEWFD AQDEAYRESV IPSSVKARVV VEAGIAQPWH RFTGDAGEIV
SIEHFGASAD YQTLFREFGF TTENVVAAAR RSLDATR
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