| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5183 |
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| Symbol | |
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| ID | 8329385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6176139 |
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| End bp | 6176789 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945622 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003102850 |
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| Protein GI | 256379190 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.866037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCA CCGGTGAGAG GGCGGTCGGT GCTCCTCGCC AGCGCGAGCG CGCGGCGAGA
CCGGTCGGCG CGGCGGCGGC CCGCGCCGCG TTAGCCGTGT CGGGGAGCGA CGTGACGGCG
GCCGTGGCGG GCGACCGCGC GGCCGTCGAG CGGCTGCTCG GCGTGCTGCG CCCGCTGATC
GTCAAGTACT GCCGGGCACG CGTCGGCGGC GCCTACGCCA CCGCCGACGA CGTGGCGCAG
GAGGTGTGCC TGGCGGTGCT GAAGGCGCTG CCGAACTACC AGGACCAGGG ACGCCCGTTC
CTGGCGTTCG TGTACGGCAT CGCCGCCCAC AAGGTGGCCG ACGTCCACCG CTTCGCGGCC
CGCAACCGCG CGGAGCCGGT GGCGGAGCTG CCGGACAAGC CGGAGTCGTC GGCGGGACCG
GAGGCGCGGG CGCTGCAGGG CGAGGTGTCG GAGCAGATGG CGGAGCTGCT GCGGGTGCTG
CCGGAGAAGC AGCGGGAGAT CCTGCTGCTG CGGGTGGTGG TGGGGATGTC GGCGGAGGAG
ACCGCGCACG CGGTGCGCTC GACGCCGGGC GCGGTGCGCG TGGCGCAGCA CCGGGCGCTG
GCGCGCCTGC GGGTGGCGCT GGCGGGCGGG GCGTCGTCGG TTCTGGCGTG A
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| Protein sequence | MEFTGERAVG APRQRERAAR PVGAAAARAA LAVSGSDVTA AVAGDRAAVE RLLGVLRPLI
VKYCRARVGG AYATADDVAQ EVCLAVLKAL PNYQDQGRPF LAFVYGIAAH KVADVHRFAA
RNRAEPVAEL PDKPESSAGP EARALQGEVS EQMAELLRVL PEKQREILLL RVVVGMSAEE
TAHAVRSTPG AVRVAQHRAL ARLRVALAGG ASSVLA
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