| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5172 |
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| Symbol | |
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| ID | 8329374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6163046 |
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| End bp | 6166117 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945611 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003102839 |
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| Protein GI | 256379179 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGGCG ACAACAGCAC GCGCAGGCAA TGGCGGACCG CCGTCGCCGA CTGGCGGAAT
TGGCGGCTGC CGGTCAAGCT GGCCGCCGTC CTCGCGGTAC CCGTGCTCGT CGCGCTCGGC
TCGGGCCTGA CGCAGATCGG GACCGACGTG CGCGCCGCCG ACGGCTACGC GAACATGCAG
CGCCTGGTGT CGCTGCGCGC GGGGCTGACC CCGCTGGTCG CGAGCGTCCA GGACGAGCGG
GCGCTGTCCG CCCAGCGCGC CGAGGGCGCG GGCGTGGACA AGCGCAACTT CGACGCCGTC
ACCAACGAGA CCGACCGCGC CGCCAACGCC GTGCGCGACC TGGTCCGCAA CACCCCCACG
CTCGGCCCCG TCGCCGAGGC CCGCTACCGC GACGCGCTCG TCCAGCTCGA CGGCCTGCCG
CAGCTGCGCG ACCGGGTCTC CAGCGGCGGC GTCGACCTCG CGGGCGGCAT CGGCGCCTAC
TCGGTGGTCA TCCGCTCCCT CACCGACTTC GACCAGGCCA TGGTCGGCGA CTTTGGCGAC
GCCTCCCTCA CCGGCACCGC GAACGCCCTG CACAACCTGG CCATGACCGG CGAGCAGGTC
TCCTGGCAGC AGGCCACCGT CCTCGCGGGC GTGAGCCGCC GGGGCCTGCT GGACACCGAG
AAGACCATGC TGGAGCAGTC CTGGACCCGC TTCCAGGACA AGGTCGCCGA GTTCACCGCG
GTGGCCACCG CCGACCAGCA GGCCGACTTC CGCAGCACCG TCGCGGGCCC CGAGGTGGAC
ACCCGCAACC GGCTGCTCCA GGGCGTGCGC ACCGATCCGG GCACCGTGCG CACCCAGGTG
CCGGTCAAGG ACTGGAACAC CGCCTCCAGC TCGACCCTGT CGCGCATCGA GGTCGTCATG
TCCCGCCTCG GCGGCGAGCT GCTGCGCGCC TCCGCCAGGC TCCAGGACTC CACCAGCGAC
CGCGCGGGCG TGGCCTCGGT CATCCTGCTC GCCTCGCTGT TCTCCGCGGG CGCCATCGGC
TTCGTCGTCG GCAGCTACCT GCTGCGCTCG CTGCGCACCC TGCGGGTGGC CGCCCTCGAC
GTCGCGAACA ACCGCCTGCC CGAGCTGGTC ACCCAGCTGC GCGAGGGCGG CGTGCGCACC
GGGATCGAGC CGGTGCCGGT GCACACCACC GAGGAGTTCG GCCAGCTGGC CCGCGCGTTC
GACGCCGTGC ACAGCCAGGC CGTCAGCTCC GCCGCCGAGC AGGCCGAGCT GCGCGCCGGG
ATGCGCAACG CGTTCATCAA CCTCTCCCGC CGCAGCCAGG GCCTGGTCGA GCGCCAGCTC
AAGCTCATGG AGGAGATGGA GCGCCAGGAG GAGAACCCCG ACCAGCTGGC GAACCTGTTC
AAGCTGGACA ACCTGGCGAC CCGGATGCGC CGCAACAACG AGAACCTGAT GGTGCTCTCC
GGCAGCGACG TGGCCCGCCG GTTCACCCGG CCGGTGCCGC TGGCCGACGT GCTGCGCGCC
GCCGGGTCCG AGATCGAGCA GTACCACCGG GTGATGGTGC AGACCACCCC GCCGGTCGAC
GTGGTCGGCT ACGCGGCGGG CGACCTGGTC CGGCTCGTCG CGGAGCTGCT CGACAACGCC
ACCGCGTTCT CCCCGCCCGG CACCCAGGTC GTCGTCAGCG GCAGGCCGCG GCCCGGCGGC
GGCGTCCTCG TCGACGTGGT CGACCAGGGC GTCGGCCTCA CCGAGGAGGG CATGGCCGAG
GCCAACCGCA AGATCGTCAC GGCGGCGCGG GACGACAGCG CCGAGCTGTC CGCGTCCCGC
CAGCTCGGCC TGTACGTGGT CGGCAGGCTC GCGGGCAGGC ACGGCATCCA GGTGGTGCTG
CGCGAGCAGG GCGCCGAGCG GGACGGCGTG CGCGCCGTCG TGGCCGTGCC CTCCGAGCTG
GTCCGCCCGG CCGGGACCGG GCAGCTGCCC GCCGCCCGCA GGCCCGCCGC CGAGCTGGAG
CGCGGCCAGG GCGGCGCCCA GCAGAGCGCG CTGCAGAGCA ACGTCGTGCA CAACGCCCTG
CAGGGCGGCT CCGGGCAGAA CGGGGCGGTC CAGAGGAGCG CGCCGCAGAA CGGGACGCCG
CAGAACGGGA CCGCGCCGTT CGGCGCGGCG CAGAACGGCG CCGCGCACAA CGGGACCGCG
CAGAACGGCA CGGCGCTCGG CGGCGCGACC CAGAACGGCC CGACCCAGAA CGGCGCGACC
TCGGGCGGCG CCCCGGTGAG CGAGAGCGGC TGGGCCGCGT TCGCCGGCCG CGCGCTCGAC
CAGACCCCGC CCGCCAAGCC GGAGCCCGGT CGATCCGAGC CCGGTCGATC CGAGCAGGGG
CGTTCGGAGA CCGCTCGTTC GGAGCCCGGT CGTTCGGAGG CCACTCGTTC GGAGCAGGGC
GGGCCGCGCG CCGAGCAGTT CGTGATGGAC GACTCGTTCT CCTTCTCGGT CGACCCGTCC
GCGCCGACCG CCGCCCCGAG GGGCGACGCC CCGCGTGCCG CCGACGCTCC GGCCGTGCCG
CCCAGGCAGG TCGAGACCCC GCCCGGTGGG GAGCTGCCCA AGCGCACCGC GACGCCCCCG
TCGCGCTCCG CGACGGACCC GTTCCGGCAG CCAGAGGCCA CGCAGGGCGG TTCGACGTGG
TTCTCCAAGC GCCCGAAGGC GCAGACCGCC GAACCGGCCG CCCACGCCGC CCCCGCCGCG
CCCCCGGTGA CGCCGCCGAC GGCGCCCCCC ACCGAGGGGG GATATGCGCC CGGCCGGGCC
ACCGCGCAGT TCTTCGGCGC GCCGTCACCC GCCAGGCAGA CGCAGCCTCC CGCTATTCCG
GCCGAAGAGG TACCGTCCCG ACACGTGACA GCCGCAGGGG CGGAGCTGCC CAAGCGCAAA
CCGCGCACCA ACCTGGACGC GAACCTGGTC ACCGAGCGGC CCGCGCGGGC TGAGGGCGAG
AGCGCTGCGC CCCCACCCGT ACGGAGGGAC CCGAGCGCGA CACGCGGGTT CCTGGCCAAC
TACCAGACCG GCGTCCGGCA AGGTGTTCGG GAGGCTGGGG ACAACAGAAC GGGGCGGGAG
ACCGAACAAT GA
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| Protein sequence | MTGDNSTRRQ WRTAVADWRN WRLPVKLAAV LAVPVLVALG SGLTQIGTDV RAADGYANMQ
RLVSLRAGLT PLVASVQDER ALSAQRAEGA GVDKRNFDAV TNETDRAANA VRDLVRNTPT
LGPVAEARYR DALVQLDGLP QLRDRVSSGG VDLAGGIGAY SVVIRSLTDF DQAMVGDFGD
ASLTGTANAL HNLAMTGEQV SWQQATVLAG VSRRGLLDTE KTMLEQSWTR FQDKVAEFTA
VATADQQADF RSTVAGPEVD TRNRLLQGVR TDPGTVRTQV PVKDWNTASS STLSRIEVVM
SRLGGELLRA SARLQDSTSD RAGVASVILL ASLFSAGAIG FVVGSYLLRS LRTLRVAALD
VANNRLPELV TQLREGGVRT GIEPVPVHTT EEFGQLARAF DAVHSQAVSS AAEQAELRAG
MRNAFINLSR RSQGLVERQL KLMEEMERQE ENPDQLANLF KLDNLATRMR RNNENLMVLS
GSDVARRFTR PVPLADVLRA AGSEIEQYHR VMVQTTPPVD VVGYAAGDLV RLVAELLDNA
TAFSPPGTQV VVSGRPRPGG GVLVDVVDQG VGLTEEGMAE ANRKIVTAAR DDSAELSASR
QLGLYVVGRL AGRHGIQVVL REQGAERDGV RAVVAVPSEL VRPAGTGQLP AARRPAAELE
RGQGGAQQSA LQSNVVHNAL QGGSGQNGAV QRSAPQNGTP QNGTAPFGAA QNGAAHNGTA
QNGTALGGAT QNGPTQNGAT SGGAPVSESG WAAFAGRALD QTPPAKPEPG RSEPGRSEQG
RSETARSEPG RSEATRSEQG GPRAEQFVMD DSFSFSVDPS APTAAPRGDA PRAADAPAVP
PRQVETPPGG ELPKRTATPP SRSATDPFRQ PEATQGGSTW FSKRPKAQTA EPAAHAAPAA
PPVTPPTAPP TEGGYAPGRA TAQFFGAPSP ARQTQPPAIP AEEVPSRHVT AAGAELPKRK
PRTNLDANLV TERPARAEGE SAAPPPVRRD PSATRGFLAN YQTGVRQGVR EAGDNRTGRE
TEQ
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