Gene Amir_5162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5162 
Symbol 
ID8329364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6155048 
End bp6155986 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content74% 
IMG OID644945601 
ProductABC transporter related 
Protein accessionYP_003102829 
Protein GI256379169 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.91236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCGA AACCCCATCG CCCTGCCGTG GAAGTGTCGG GGCTGGTGAA GCGGTACGGC 
GCCAAGACCG CGGTGAACGG CCTCGACCTC GTCCTGGAGC AGGGCAGCGT GCTGGCGCTG
CTCGGCCCGA ACGGCGCGGG CAAGACGACC ACCGTCGAGG TGTGCGAGGG CTTCCGCGCC
GCCGACGCGG GTCAGGTGCG CGTGCTCGGA CTGGACCCGT GGCGCGACGG CGACCGGCTG
CGGCCCCGCG TGGGCGTGAT GCCCCAGGGC GGCGGCGGGT ACCCCGGGAT CCGCGCGGAC
GAGATGCTGC GGCTGGTGGC CGCGTGCGCC GCGAACCCGC TGGACCCGGC CTGGCTGCTG
GAGGTCCTCG GGCTCGACGG CGTCGGCCGC ACCACGTACA AGCGGCTGTC CGGTGGGCAG
CAGCAGCGCC TGTCGCTGGC GTGCGCGCTC GTCGGCAGGC CGGAGCTGGT GTTCCTGGAC
GAGCCGACGG CGGGCATGGA CCCGCAGGCG CGCAGGCTCG TGTGGGACCT CGTCGCGGCC
CTCAGGGCCG ACGGGGTGAG CGTGCTGCTG ACCACGCACC TGATGGACGA GGCCGAGGCG
CTGGCCGACC ACGTGGTGAT CGTGGACAGC GGGCAGGTGG TCGCGCAGGG CAGCCCGAGC
GAGCTGACCG CGCACAGCGC CGACGAGCAG CAGCTGCGCT TCCGCGCGAA GCCGGGCCTG
GACACCTCGC TGCTGATCGC CGCCCTCCCC GAGGGCATGG GGGTGCGCGA GACCGTCCGG
GGCGCGTACC TGGTCGAGGG CAAGGTCGAC CCGCAGGTGG TGTCGACCGT GACGTCGTGG
TGCGCCCAGC AGGGCGTGCT CGCCGAGGAG CTGACGGTGG CCAAGCGCAG CCTCGAGGAC
GTGTTCCTGG AGCTGACCGG CAGGGAGCTG CGGTCGTGA
 
Protein sequence
MSPKPHRPAV EVSGLVKRYG AKTAVNGLDL VLEQGSVLAL LGPNGAGKTT TVEVCEGFRA 
ADAGQVRVLG LDPWRDGDRL RPRVGVMPQG GGGYPGIRAD EMLRLVAACA ANPLDPAWLL
EVLGLDGVGR TTYKRLSGGQ QQRLSLACAL VGRPELVFLD EPTAGMDPQA RRLVWDLVAA
LRADGVSVLL TTHLMDEAEA LADHVVIVDS GQVVAQGSPS ELTAHSADEQ QLRFRAKPGL
DTSLLIAALP EGMGVRETVR GAYLVEGKVD PQVVSTVTSW CAQQGVLAEE LTVAKRSLED
VFLELTGREL RS