Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5162 |
Symbol | |
ID | 8329364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6155048 |
End bp | 6155986 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945601 |
Product | ABC transporter related |
Protein accession | YP_003102829 |
Protein GI | 256379169 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.91236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCCGA AACCCCATCG CCCTGCCGTG GAAGTGTCGG GGCTGGTGAA GCGGTACGGC GCCAAGACCG CGGTGAACGG CCTCGACCTC GTCCTGGAGC AGGGCAGCGT GCTGGCGCTG CTCGGCCCGA ACGGCGCGGG CAAGACGACC ACCGTCGAGG TGTGCGAGGG CTTCCGCGCC GCCGACGCGG GTCAGGTGCG CGTGCTCGGA CTGGACCCGT GGCGCGACGG CGACCGGCTG CGGCCCCGCG TGGGCGTGAT GCCCCAGGGC GGCGGCGGGT ACCCCGGGAT CCGCGCGGAC GAGATGCTGC GGCTGGTGGC CGCGTGCGCC GCGAACCCGC TGGACCCGGC CTGGCTGCTG GAGGTCCTCG GGCTCGACGG CGTCGGCCGC ACCACGTACA AGCGGCTGTC CGGTGGGCAG CAGCAGCGCC TGTCGCTGGC GTGCGCGCTC GTCGGCAGGC CGGAGCTGGT GTTCCTGGAC GAGCCGACGG CGGGCATGGA CCCGCAGGCG CGCAGGCTCG TGTGGGACCT CGTCGCGGCC CTCAGGGCCG ACGGGGTGAG CGTGCTGCTG ACCACGCACC TGATGGACGA GGCCGAGGCG CTGGCCGACC ACGTGGTGAT CGTGGACAGC GGGCAGGTGG TCGCGCAGGG CAGCCCGAGC GAGCTGACCG CGCACAGCGC CGACGAGCAG CAGCTGCGCT TCCGCGCGAA GCCGGGCCTG GACACCTCGC TGCTGATCGC CGCCCTCCCC GAGGGCATGG GGGTGCGCGA GACCGTCCGG GGCGCGTACC TGGTCGAGGG CAAGGTCGAC CCGCAGGTGG TGTCGACCGT GACGTCGTGG TGCGCCCAGC AGGGCGTGCT CGCCGAGGAG CTGACGGTGG CCAAGCGCAG CCTCGAGGAC GTGTTCCTGG AGCTGACCGG CAGGGAGCTG CGGTCGTGA
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Protein sequence | MSPKPHRPAV EVSGLVKRYG AKTAVNGLDL VLEQGSVLAL LGPNGAGKTT TVEVCEGFRA ADAGQVRVLG LDPWRDGDRL RPRVGVMPQG GGGYPGIRAD EMLRLVAACA ANPLDPAWLL EVLGLDGVGR TTYKRLSGGQ QQRLSLACAL VGRPELVFLD EPTAGMDPQA RRLVWDLVAA LRADGVSVLL TTHLMDEAEA LADHVVIVDS GQVVAQGSPS ELTAHSADEQ QLRFRAKPGL DTSLLIAALP EGMGVRETVR GAYLVEGKVD PQVVSTVTSW CAQQGVLAEE LTVAKRSLED VFLELTGREL RS
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