| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5150 |
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| Symbol | |
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| ID | 8329352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6138517 |
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| End bp | 6139794 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945589 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003102817 |
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| Protein GI | 256379157 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACCA CCGCTGCTCC GCTGGACGTC GAAGTCGTGC GCGCGGACTT CCCGATCCTG
GGCCGCACCG TGCGCGAGGG CAAGCGGCTG GTCTACCTCG ACTCCGGCGC CACCTCGCAG
CGCCCGAGCC AGGTCCTGGA CGCCGAGCGG GCGTTCCTGG AGACCGCCAA CGCCGCGGTC
CACCGCGGCG CGCACCAGCT GGCCGAGGAG GCCACCGACG CCTACGAGGA CGCCCGCCGC
AGGATCGCGG GCTTCGTCGG CGTCGGCGTC GACGAGGTCG TGTTCACCAA GAACGCGACC
GAGGGCGTCA ACCTGGTCGC GTACGCCATG GGCAACGCGG CCACGGCGGG CCCGGAGGCC
GAGCGCTTCC TGCTGGGCCC CGGCGACGAG ATCGTCGTGA CCGAGATGGA GCACCACGCC
AACCTGGTGC CGTGGCAGCA GCTCGCGCTG CGCACCGGGG CCACGCTGCG CTGGCTCGGC
GTCACCGACG AGGGCAGGCT CGACCTGTCG AACCTGGACG AGGTGGTGAA CGAGCGCACC
AAGGTGCTCG CGTTCACCCA CCAGTCCAAC GTGCTCGGCA CGGTCAACCC GGTCGCCGCC
CTCGTCGCCG CGGCGGCGCG GGTCGGCGCG CTGACCGTGC TCGACGCCTG CCAGTCCGTG
CCGCACGCGC CCGTCGACTT CCGCGCCCTC GGCGTGGACT TCGCCGTCTT CAGCGGCCAC
AAGATGCTCG GTCCCTCGGG CGTCGGCGTC CTCTACGGCC GCCGCGCGCT CCTGGAGGCG
CTGCCCCCGT TCCTCACCGG CGGCTCCATG ATCGAGATGG TCGAGATGGC CCGCTCCACG
TTCGCCCCGC CGCCGCAGCG GTTCGAGGCG GGCGTGCCGA TGACCTCGCA GGCCGTCGCG
CTCGGCGCCG CCGTCGACTA CCTGAACGCG GTCGGCATGG ACCGGGTCGC CGCGCACGAG
CACGAACTGG TCGCCGCCGC CCTCAGCGGC CTGGCGGCCA TTCCCGGCGT GCGCGTGGTC
GGCCCCACCG ACCTCGCCGA CCGGGGCGGC GCGGTCTCGT TCGTGGTCGA CGGGGTGCAC
GCGCACGACG TCGGCCAGGT CCTGGACAGC CTCGGCGTCG CGGTCCGCGT CGGCCACCAC
TGCGCGTGGC CGCTGCACCG CAGGATGAAC GCCGCGGCCA CCGTGCGGGC CAGCTTCTAC
CTCTACAACA CGCAGGGCGA GGTGGACGCG CTGCTGTCCG CCGTCCGCGA GGCGCAGAAG
TTCTTCGGGG TGGCGTGA
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| Protein sequence | MTTTAAPLDV EVVRADFPIL GRTVREGKRL VYLDSGATSQ RPSQVLDAER AFLETANAAV
HRGAHQLAEE ATDAYEDARR RIAGFVGVGV DEVVFTKNAT EGVNLVAYAM GNAATAGPEA
ERFLLGPGDE IVVTEMEHHA NLVPWQQLAL RTGATLRWLG VTDEGRLDLS NLDEVVNERT
KVLAFTHQSN VLGTVNPVAA LVAAAARVGA LTVLDACQSV PHAPVDFRAL GVDFAVFSGH
KMLGPSGVGV LYGRRALLEA LPPFLTGGSM IEMVEMARST FAPPPQRFEA GVPMTSQAVA
LGAAVDYLNA VGMDRVAAHE HELVAAALSG LAAIPGVRVV GPTDLADRGG AVSFVVDGVH
AHDVGQVLDS LGVAVRVGHH CAWPLHRRMN AAATVRASFY LYNTQGEVDA LLSAVREAQK
FFGVA
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