Gene Amir_5149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5149 
Symbol 
ID8329351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6138074 
End bp6138517 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID644945588 
ProductSUF system FeS assembly protein, NifU family 
Protein accessionYP_003102816 
Protein GI256379156 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.726273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTTC AGCAGATGTA CCAGGAGATC ATCCTGGACC ACTACAAGAA CCCGCACGGC 
CGCGGCCTGC GGGACCCGTA CGACGCCGAG TCCCACCAGA TCAACCCCAC CTGCGGCGAC 
GAGGTCACGC TCAGGGTGAA GCTGGACGGG CCGCTCGTCG CCGACGTCTC CTACGACGGC 
CAGGGCTGCT CGATCAGCCA GGCCGCCACG TCCGTGCTCA CCGACCTGGT GGTCGGCAAG 
CCGGTCGAGC AGGCCATGGG CAAGCTCGAC GCGTTCGTCG AGCTGATGCA GGGCCGCGGC 
CAGGTGGAGC CGGACGAGGA CGTGCTGGAG GACGGCATCG CGTTCGCGGG TGTGGCGAAG 
TACCCGGCGC GCGTGAAGTG CGCGCTGCTG GGCTGGATGG CTTTCAAGGA CGCGGTTTCC 
CGCAGCGAGG GAGCGAAGTC GTGA
 
Protein sequence
MQLQQMYQEI ILDHYKNPHG RGLRDPYDAE SHQINPTCGD EVTLRVKLDG PLVADVSYDG 
QGCSISQAAT SVLTDLVVGK PVEQAMGKLD AFVELMQGRG QVEPDEDVLE DGIAFAGVAK 
YPARVKCALL GWMAFKDAVS RSEGAKS