| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5145 |
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| Symbol | |
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| ID | 8329347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6134080 |
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| End bp | 6135777 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945584 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003102812 |
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| Protein GI | 256379152 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.881972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGCCC TGCTGGACGA TGTCCGATTC GCCTTCCAGC CCCTGTTCAA CCTGAACACC
GGTGGGGTCG TCGCGGTCGA GGCCCTGGCC CGGCCGCACG ACGGCACCGC GCTCGACCTG
CTCCAGGCGG CGTTCCGCGC CGGGCACCTG GTGGACGCGG ACGTCGCGCT CGCCTGCCGC
GCGGTCCGGC ACGCGGCCGA GCACGAGTTC GGGCTGCCGC TGCACGTCAA CCTCATGTCG
ATGACCGTCG CGGAGCAGCC GGAGAAGCTG GAGCCGCTGC TGCGCGCGCT GCACGAGGTC
GGCCGCTCCC CCGACCGCCT GGTGGTGGAG CTGGGCGTGC CGTACACGCG CACCCCGCGC
AAGGCGCTGC TGGCCGGCGT GCGGTGGCTG CGGGACGCGG GCGTGCGGGT GGCGCTGGAC
GGGGTGGGCG ACGGCGACGT GCCGCTCGCG CTGCTCACCG ACGTGGCCCC GGACCAGCTC
AAGCTGGACC GGGGCATCGT CGTCGGCCTC CCCGACGACG GCGGCCGGGC GGCGCTGCTG
ACCGCGCTGC TGGGCGTGTG CGAGCAGACC GGCTCGGTGC TGGTGGCCGA GGGCGTGGAG
ACCGAGGCGC AGCTGGCCGC GCTGCGGCGG GCCGGGGTGC GGATGGCGCA GGGCGACCTG
CTGGCGCCCG CGCGGCGGCG GCCGGACGTG GCGGCGACGA TCCCGTCCGC GCTCGCCGAG
ACCGCGGACC CGGAGGCGGT GGCGCGCACG ACGCCGAACC TGCGGCTGGC CGGGCCGAGC
GTGACCGACT TCCTGCACCC GGCGACCACC CTGCCCGAGA CGGCGACCGC CGAGGAGGTG
CGGGAGGTCC TGGCCGCGCA GCCGTCGGTG ACCGGTGTGG TGCTGGTCGA CGGGCGGGGC
AGGCCGTCGT GGACGCTGGA GCGCAACCGG TTCCTGCTCG CGGTGACCGG GCCGTTCGGG
CACGCGCTGC ACGCCAACCG GGAGGCGTCG CGGCTCGCGG ACCGGCCGAG GGCGGTGGGG
GCGCGGTTCA GCGCGCTGGA GCTGCTGGAG GTCGTCACGC ACGGGGACCG GGAGCGGGCG
AACGACGACC TGGTCGTGGT GGACGAGGAC GACAAGTGCC TCGGCGTCGT GCGGGTGGCG
GACGTGGTGC GCGGGGTCGC CGAGCTGAAG GTGGAGCAGG CGGCGTCGAT GAACCCGCTG
ACCCGGTTGC CGGGCAGCGA GTCGATCGCG CGCGAGGTGG AGCGGCGGGT GCTGGCGGGC
GAGGTGTTCG CCGTGGGCTG GCTGGACGTG GACTCGTTCA AGGGCGTGAA CGACCGGGCC
GGGTTCGCGG CGGGCGACGA CCTGATCCGC GCGGTGGGCA GGCGGCTGGC CGAGGGGGTC
GCCGGGCTGT CGACGGTGCG GGTGGGCCAC GTGGGCGGGG ACGACTTCCT GCTGGTGGCG
GGCCTGGACG AGCTGATCGG GTTCGGGGCC GGGGTGCTGG ACTCGGAGTT CGGCGTCGAC
GGGCTGCGGG TGACGCTGTC GCTGGCGACG CTGGTGTGCG CGACCGGGTC GGTGGGCTCG
TACCGCGAGG TGTCCCGGCT GCTGGCCCCG CTCAAGCGGC AGGCGAAGTC GCTGAGCGGG
TCGAGCTGGG TGCTGGGCAG GCCGGGCACG GACCGGGTGG ACGTGCTGCG CGGCGGACCG
CACCTCGCGG TCGGCTGA
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| Protein sequence | MPALLDDVRF AFQPLFNLNT GGVVAVEALA RPHDGTALDL LQAAFRAGHL VDADVALACR
AVRHAAEHEF GLPLHVNLMS MTVAEQPEKL EPLLRALHEV GRSPDRLVVE LGVPYTRTPR
KALLAGVRWL RDAGVRVALD GVGDGDVPLA LLTDVAPDQL KLDRGIVVGL PDDGGRAALL
TALLGVCEQT GSVLVAEGVE TEAQLAALRR AGVRMAQGDL LAPARRRPDV AATIPSALAE
TADPEAVART TPNLRLAGPS VTDFLHPATT LPETATAEEV REVLAAQPSV TGVVLVDGRG
RPSWTLERNR FLLAVTGPFG HALHANREAS RLADRPRAVG ARFSALELLE VVTHGDRERA
NDDLVVVDED DKCLGVVRVA DVVRGVAELK VEQAASMNPL TRLPGSESIA REVERRVLAG
EVFAVGWLDV DSFKGVNDRA GFAAGDDLIR AVGRRLAEGV AGLSTVRVGH VGGDDFLLVA
GLDELIGFGA GVLDSEFGVD GLRVTLSLAT LVCATGSVGS YREVSRLLAP LKRQAKSLSG
SSWVLGRPGT DRVDVLRGGP HLAVG
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