Gene Amir_5124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5124 
Symbol 
ID8329322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6105572 
End bp6106390 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content75% 
IMG OID644945560 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003102792 
Protein GI256379132 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGC GGACGGACCA GGGCGTGTTC GACGCGATCG CCGCGGGCCC CGAGGACGGG 
CGCCCGGTGC TGCTGCTGCA CGGCTTCCCG CAGGCGGCGG TGTGCTGGGA GCACCAGGTG
GCGGTGCTCG GCCGCGAGGG CTACCGGGCG GTCGCGTTCG ACCAGCGCGG CTACTCCCCC
GGCGCCCGAC CGGCCGAGGT GGCCGCGTAC GGGATGGGGT CGCTGGTGGG CGACGTGCTC
GCGGTGGCCG ACGCGCTGGG CTGGCCGGTG TTCGACCTGG TCGGGCACGA CTGGGGCGGG
GCGGTGGCGT GGTGGGCGGC GGCCGAGCAC CCGGAGCGGC TGCGCTCGCT GACCGTCGTG
TCGACCCCGC ACCCGGCCGC GCTCGGCGAG GCGATGCGCA CCGACGAGGA GCAGCACCAG
CGGTCCGGGT ACATGGCGCA GCTGCGCTCG TCCGGCGCGG AGAAGCAGCT GCTCGCGAAC
GACGCGGAGG CGCTGCGGCG GATCTTCGAC TGGCGGGTGC AGCCGGGCCG GGTGGACGAG
TACGTGTCGC GGCTGAAGGA GCCGGGGGCG CTGACGGCGG CCCTCAACTG GTACCGGGCG
AGCCGCCCCG ACGGCCGGAT CGGGAAGGTG ACGACGCCCA CCCTCTACGT GTGGACGACC
GAGGACGTGG CCTTCGGCTC CACGGCCGCG CTGGCCACGG GCGACTGGGT GACCGGCCCT
TACACCTTCC GGATGCTGGA GGACGTGTCG CACTGGGCGC CCGAGGAGGC CCCCGAGGCG
GTCACCGCCC TGCTGCTGGC CAACCTGTCG ATTTCATGA
 
Protein sequence
MSVRTDQGVF DAIAAGPEDG RPVLLLHGFP QAAVCWEHQV AVLGREGYRA VAFDQRGYSP 
GARPAEVAAY GMGSLVGDVL AVADALGWPV FDLVGHDWGG AVAWWAAAEH PERLRSLTVV
STPHPAALGE AMRTDEEQHQ RSGYMAQLRS SGAEKQLLAN DAEALRRIFD WRVQPGRVDE
YVSRLKEPGA LTAALNWYRA SRPDGRIGKV TTPTLYVWTT EDVAFGSTAA LATGDWVTGP
YTFRMLEDVS HWAPEEAPEA VTALLLANLS IS