Gene Amir_5118 details

Gene Information

• Locus tag: Amir_5118
• ID: 8329316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6097783
• End bp: 6098235
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644945554
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_003102786
• Protein GI: 256379126
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.802791
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCAG GCGATCCGGT CAACGACTTC ACGCTGCCCG ACCAGGACGG CGAACCGCGC 
ACCCTGTCCG CGCTGCTGGC GGACGGGCCG GTGGTGCTGT TCTTCTACCC GTCGGCGATG 
ACCAGCGGGT GCACGGCCGA GAGCTGCCAC TTCCGGGACC TGGCCGCCGA GTTCGCGCAG 
GCGGGCGCGC AGCGGGTGGG CATCAGCACG GACTCGGTGG CGCGGCAGAA GCAGTTCGCG 
GACATCAACA GCTTCGACTA CCCGCTGCTG TCCGACGCGG ACGGGGCGGT GGCCGAGGCG 
TTCGGGGTGA AGCGGCGGTT CGGGCCGCTG CCGGTGAAGC GGCACACGTT CGTGATCGGG 
ACGGACCTGA CGGTGCTGGA GGTGATCAAG TCGGAGTTCG CGATGAACGC GCACGCCGAC 
AAGGCGCTGG CGGTGCTGCG GGAGCGCGGC TGA 

 

Protein sequence

MKPGDPVNDF TLPDQDGEPR TLSALLADGP VVLFFYPSAM TSGCTAESCH FRDLAAEFAQ 
AGAQRVGIST DSVARQKQFA DINSFDYPLL SDADGAVAEA FGVKRRFGPL PVKRHTFVIG 
TDLTVLEVIK SEFAMNAHAD KALAVLRERG