| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5114 |
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| Symbol | |
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| ID | 8329312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6091782 |
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| End bp | 6093908 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644945550 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_003102782 |
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| Protein GI | 256379122 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.84007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGCCCT GGCCTGGAAC GCCCTACCCG CTCGGCGCCA CGTACGACGG CGTCGGCACC
AACTTCACCC TGTTCTCCGA GGCAGGAGAA TGGGTCGAGC TGTGCCTGTT CGACGACGAG
GGCAACGAGG AGCGCGTCAG GCTCCCCGAG GTCGACGGCT TCGTCCACCA CGGCTACCTG
CTCGGCATCG GCCCCGGCCA GCGCTACGGC TACCGCGTGC ACGGCCCGCA CCAGCCTGAG
CAGGGCCTGC GCTGCAACCC GAACAAGCTC CTCATCGACC CCTACGCCAA GGCCATCGAC
GGCGAGGTGA AGTGGCACGA GTCGCTGTTC GGCTACCCCT TCGGCGACCC CGACGCCCGC
AACGACCAGG ACTCGGCGGG CCACGTGCCG CTGTCGCTCG TGGTCAACCC GTTCTTCGAC
TGGGCCAACG ACCGCCCGCC GAAGATCCCC TACAACGAGA CCGTCATCTA CGAGGCGCAC
GTCCGGGGCC TGACGATGCG GCACCCGGAG GTCCCCGAGC GGCTGCGCGG CACCTACGCG
GGCCTGGCCC ACCCGGTGAT CATCGACCAC CTGAAGAAGC TCGGCGTCAA CGCCATCGAG
CTGATGCCGG TGCACCAGTT CGTCACCGAC CACGGCCTGG TCGAGAAGGA GCTGCGCAAC
TACTGGGGCT ACAACACGAT CGGGTTCTTC GCCCCGCACG ACGGCTACTC CGCGCTCGGG
CACGACGCCG GCCAGGTCCA GGAGTTCAAG GGCATGGTCA GGGCGCTGCA CGAGGCGGGC
ATCGAGGTCA TCCTCGACGT GGTCTACAAC CACACCGCCG AGGGCAACCA CCTCGGGCCG
ACCCTGTCCA TGCGCGGCAT CGACAACCAG GCCTACTACC GCCTGGTCGA GGACGAGCCG
AAGTACTACA TGGACTACAC CGGCACCGGC AACTCCATGA ACGTGCGCAG CCCGCACACG
CTGCAGCTCA TCATGGACTC GCTGCGCTAC TGGGTCACCG AGATGCACGT CGACGGCTTC
CGCTTCGACC TCGCCGCCAC CCTGGCCCGC GAGTTCTACG ACGTGGACCG GCTGTCGACG
TTCTTCGACC TGGTGCAGCA GGACCCGGTG GTCAGCCAGG TCAAGCTCAT CGCCGAGCCG
TGGGACGTCG GCCCCGGCGG CTACCAGGTC GGCAACTTCC CGCCGCTGTG GACCGAGTGG
AACGGCAAGT ACCGCGACAC CGCCCGCGAC TTCTGGCGCG GCGAGCCCGC CACCCTCGGC
GAGTTCGCCT CCCGCTTCAC CGGCTCCTCC GACCTGTACA AGGAGGACGG GCGCAGGCCG
TACGCGTCGA TCAACTTCGT CACCGCGCAC GACGGCTTCA CCCTCACCGA CCTCGTCTCG
TACAACGACA AGCACAACCT GGCCAACGGC GAGGACGGCC GCGACGGCGC GGACGACAAC
CGCTCGTGGA ACTGCGGCGT CGAGGGCCCC ACCGACGACC CCGAGGTCAA CGAGCTGCGC
GAGCGCCAGC GGCGCAACCT GCTCACCACG CTGCTGCTGT CCCAGGGCGT GCCGATGCTG
CTGCACGGCG ACGAGCTCGG CCGCACCCAG CAGGGCAACA ACAACGCCTA CTGCCAGGAC
AACGAGCTGT CCTGGGTCGA CTGGACGCTG CTGGAGAAGA ACCAGCCGCT GCTCGACTTC
ACCTCGGGCC TGACCGACTT CCGCAAGAAG CACCCGGTGT TCCGGCGCAG GCGCTTCTTC
CAGGGCAGGC CCATCCGCAA GGGCGAGGAG CTGCGCGACA TCGCGTGGTT CACCCCGGCG
GGCGAGGAGA TGACCGAGCA GAACTGGGAG GACGGCTTCG GCCGCTGCGT CTCGGTGTTC
CTCAACGGCA AGGGCATCCC GGACCTCGAC CAGCGCGGCA TGAAGGTCGA GGACGACTCG
TTCCTGGTGG TGTTCAACGC CCACCACGAG GACATCGAGA TCACCCTCCC CGGCGAGGGC
TACGGCCCGG AGTGGGCCGT GGTCATCGAC ACCGCGACCG GCGAGATCGC CGCGTTCCCG
CAGGACGAGC CCACGATCCC GGCGGGCGGC AGCGTCACCG CCACCGCGCG CTCGGTCGTC
GTGCTCCAGC GGATGGGGGC CGAGTGA
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| Protein sequence | MRPWPGTPYP LGATYDGVGT NFTLFSEAGE WVELCLFDDE GNEERVRLPE VDGFVHHGYL
LGIGPGQRYG YRVHGPHQPE QGLRCNPNKL LIDPYAKAID GEVKWHESLF GYPFGDPDAR
NDQDSAGHVP LSLVVNPFFD WANDRPPKIP YNETVIYEAH VRGLTMRHPE VPERLRGTYA
GLAHPVIIDH LKKLGVNAIE LMPVHQFVTD HGLVEKELRN YWGYNTIGFF APHDGYSALG
HDAGQVQEFK GMVRALHEAG IEVILDVVYN HTAEGNHLGP TLSMRGIDNQ AYYRLVEDEP
KYYMDYTGTG NSMNVRSPHT LQLIMDSLRY WVTEMHVDGF RFDLAATLAR EFYDVDRLST
FFDLVQQDPV VSQVKLIAEP WDVGPGGYQV GNFPPLWTEW NGKYRDTARD FWRGEPATLG
EFASRFTGSS DLYKEDGRRP YASINFVTAH DGFTLTDLVS YNDKHNLANG EDGRDGADDN
RSWNCGVEGP TDDPEVNELR ERQRRNLLTT LLLSQGVPML LHGDELGRTQ QGNNNAYCQD
NELSWVDWTL LEKNQPLLDF TSGLTDFRKK HPVFRRRRFF QGRPIRKGEE LRDIAWFTPA
GEEMTEQNWE DGFGRCVSVF LNGKGIPDLD QRGMKVEDDS FLVVFNAHHE DIEITLPGEG
YGPEWAVVID TATGEIAAFP QDEPTIPAGG SVTATARSVV VLQRMGAE
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