| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5104 |
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| Symbol | |
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| ID | 8329302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6080073 |
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| End bp | 6080927 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945540 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102772 |
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| Protein GI | 256379112 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCCG GTGATCGCCC GCTCGCCGTC GTGACGGGCG CGTCCACCGG GATCGGCGCC
GCCACCGCCC GCGCACTGGC CGGGCGGGGG TTCCACGTGC TCGCCGGGGT GCGGCGGGAG
CGGGACGGCG ACGCGCTGCG CGGGTCCGGC GTCGAGCCGG TGCTGCTGGA CATCACCCGG
CCGGAGCAGG TCGCCGCGCT CGTCGACCGG ATCGGGGGAC GGGGGCTGCG GGCGCTGGTC
AACAACGCCG CCGTGTCCGT CAACGCGCCC GTGGAGGCGC TGCCGCTCGA CGCGTGGCGG
GAGCTGTTCG AGGTCAACCT GTTCGGCCAC GTCGCCGTCA CCCAGGCGGT GCTGCCCGCG
CTGCTGCGCG ACGGCGGTGG GCGGGTGGTG AACATCAGCT CGGTCGGCGG CCGGGTCGCC
ATGGCCACGT ACGGGCCGTA CGCGGGGACC AAGTTCGCGC TGGAGGCGGT CAGCGACGCC
CTCCGCCGCG AGCTCGCGCC GCACGGGGTG CGGGTGGTGG TCGTGGAGCC CGGCGGGGTG
CGCACCCGGA TGGGCGACCG GGGGATCGCC ACCACCAGGC GGCGGGCCGA GGGCATGTCC
GACGAGCTGC GGGGCCGGTA CGGGCCGCTG GTGGAGGCGG TCACCGCGCA CACGGCCGCG
CACCTCGAAC GGGGCATCTC ACCCGAGCGG GCGGCCTCGG TGGTGGCGAA GGCGGTCACG
GCGCGCAACC CCCGCACCCG GTACGCCGCC GGGCTCGACG CGGCCGTGCT CACCCGGCTG
GCGCGGGTGC TGCCGGACCG CCTCCTGGAC TGGGTCGCCG CCGCCAGCCT GCGCCCCTAC
TACCCGGCGA TCTGA
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| Protein sequence | MPSGDRPLAV VTGASTGIGA ATARALAGRG FHVLAGVRRE RDGDALRGSG VEPVLLDITR
PEQVAALVDR IGGRGLRALV NNAAVSVNAP VEALPLDAWR ELFEVNLFGH VAVTQAVLPA
LLRDGGGRVV NISSVGGRVA MATYGPYAGT KFALEAVSDA LRRELAPHGV RVVVVEPGGV
RTRMGDRGIA TTRRRAEGMS DELRGRYGPL VEAVTAHTAA HLERGISPER AASVVAKAVT
ARNPRTRYAA GLDAAVLTRL ARVLPDRLLD WVAAASLRPY YPAI
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