Gene Amir_5095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5095 
Symbol 
ID8329293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6074158 
End bp6074544 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content73% 
IMG OID644945531 
Productanti-sigma-factor antagonist 
Protein accessionYP_003102763 
Protein GI256379103 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCGT TGTCGGTCGA GTCCCACCGC ACCGGGTGCG CGGTGGTGGA CGTGGCCGGG 
GAGCTGGACC TCACGGGCGC CAGGAAGGTG CTCGAGAAGC TGGACCGGCT GATCGCGGAG
GGCCGCGTCC GGGTGGTCCT GGACATGTCC GGGGTGTCGT TCTGCGGGGC GCAGGCGATG
AGCGTGCTGG TGCGCACGCG GGCGCGGGCG CAGCGGGAGG GCGGCTGGCT GCGGCTGGCC
GCCGTGCCGC CGCACGTGCG CAGGGTGTTC GTGCGCACCG ACCTGGACCG GTTGTTCCCG
CACTACCCGG ACGTCGCCTC GGCGGCGTCC GGCAGGTCCG TTTCCGCACC GGCACCTCGG
GTACCTGAGC AGAAGTCGGG GACCTGA
 
Protein sequence
MLALSVESHR TGCAVVDVAG ELDLTGARKV LEKLDRLIAE GRVRVVLDMS GVSFCGAQAM 
SVLVRTRARA QREGGWLRLA AVPPHVRRVF VRTDLDRLFP HYPDVASAAS GRSVSAPAPR
VPEQKSGT