| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5091 |
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| Symbol | |
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| ID | 8329289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6067224 |
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| End bp | 6071663 |
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| Gene Length | 4440 bp |
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| Protein Length | 1479 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644945527 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_003102759 |
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| Protein GI | 256379099 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.493325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACCG CTCGGGACGA CACGGACGTG ACCCTGGACC GGCTGCTGGC CGCGCTGAGG
GAGATGCGCG ACGGGAACTT CCGCCGCCGC CTGGTGGTGC CGTTCGGCAG CAGGTTCGCC
GAGGTGGCCG CGGTGTTCAA CGAGATCTCC GAGCGCAACC AGGCGCTCGT GGGCGAGCTG
GTGCGGGTGC GGCAGTCCGT CGGGCAGGAG GGCAGGCTCG GCGAGCGGCT CAGCCCCGGC
GCGGGCGGCC CCGGTGGCTG GGCGATGGCG ACCGACTCGG TGAACGGGCT GATCGACGAC
CTGAGCGCGC CGACGACCGA GCTGAGCCGG GTGCTGGCGG CGGTGGCGCG CGGCGACCTG
TCGCAGGAGC TGACCGTGAG CTCGCGCGGG GAGCTGGCCG CGCTGGTGGA CAGCTTCGAC
TCGATGACGT CGACGCTGCG CACGTTCGCG GGCGAGGTGA CCCGCGTGGC GCGCGAGATC
GGCACGGACG GCCGCCTCGG CGGCCAAGCC CAGGTGCCGG GGGTGGCGGG CACCTGGAAG
GACCTCACCG ACAACGTCAA CTTCATGTCG AGCAACCTCA CCGCCCAGGT CCGCGACATC
GCGCAGGTGG CGACCGCGGT GGCGCAGGGC GACCTGTCCC AGAAGATCAC CATCACCGTC
GCGGGCGAGA TGCTGGAGCT GAAGGAGACC ATGAACACGA TGGTCGACCA GCTCTCCTCG
TTCGCCGACG AGGTGACGCG CGTGGCCCGC GAGGTCGGCA CCGACGGCCG CCTCGGCGGC
CAAGCCCAGG TGTCCGGGGT CGCGGGCACC TGGAAGGACC TCACCGACAA CGTCAACTTC
ATGGCGGGCA ACCTCACCGC CCAGGTGCGC AACATCGCGC AGGTCGCGAC GGCCGTGGCG
CGCGGCGACC TGTCCCAGAA GATCACCGTC GACGCGCGCG GCGAGATCCT GGAGCTCAAG
AACACCCTCA ACACCATGGT CGACCAGCTC TCCTCCTTCG CCGACGAGGT CACGCGCGTG
GCCCGCGAGG TCGGCACCGA GGGCAAGCTC GGCGGCCAGG CCGAGGTCGA GGGCGTCTCG
GGGACCTGGC AGAAGCTCAC CGAGAGCGTG AACTCGATGG CGGGCAACCT GACCAGCCAG
GTCCGCAACA TCGCGCAGGT GACCACGGCG GTGGCGCAGG GCGACCTGTC GCAGAAGATC
GACGTGGACG CGCGCGGCGA GATCCTCCAG CTCAAGACCA CGATCAACAC GATGGTCGAC
CAGCTCTCCT CGTTCGCCGC CGAGGTCACC CGCGTGGCCC GCGAGGTGGG CAGCGACGGG
CGGCTCGGCG GTCAGGCGCA GGTGCCGGGC GTCGGCGGGA CGTGGCGCGA CCTCACCGAC
AGCGTGAACT TCATGGCGGG CAACCTCACC AGCCAGGTCC GCAACATCGC GGGCGTGGCG
ACGGCGGTGG CGCGCGGCGA CCTGTCGCAG AAGATCACGG TGACCGCGCG CGGGGAGATC
CTGGAGCTCA AGGAGACCCT CAACACGATG GTCGACCAGC TCTCCTCGTT CGCCGACGAG
GTCACGCGCG TCGCCCGCGA GGTCGGCACG GACGGGCGCC TCGGCGGCCA AGCGCAGGTG
CCGGGCGTCG CGGGGACCTG GCGCGACCTC ACCGACAGCG TGAACTTCAT GGCGAACAAC
CTCACCGCGC AGGTGCGGTC GATCGCCCAG GTGACCACGG CGGTGGCGGG CGGCGACCTG
TCCCAGAAGA TCACCGTCGA CGCGCGCGGC GAGATCCTGG AGCTCAAGAG CACGATCAAC
ACGATGGTCG ACCAGCTCTC CTCGTTCGCC GACGAGGTGA CGCGCGTGGC CCGCGAGGTC
GGCACCGACG GCCGCCTCGG CGGCCAGGCC CGCGTCCCCG GCGTCGCCGG GACCTGGAAG
GACCTCACCG ACAACGTCAA CGTCATGGCG GACAACCTGT CCAGCCAGGT GCGGTCGATC
GCGCTGGTGT CCACGGCGGT CGCGGGCGGC GACCTGTCCA AGAAGATCAC CGTCGAGGCC
AAGGGCGAGA TCGCCGCGCT GGCCGACACG ATCAACCGCA TGGTCGACAC GCTGTCCGCG
TTCGCGGACG AGGTCACGCG CGTGGCCCGC GAGGTCGGCA CCGACGGCCG CCTCGGCGGC
CAGGCCCGCG TCCCCGGCGT CGCCGGGACC TGGAAGGACC TCACCGAGAA CGTCAACTTC
ATGGCGAACA ACCTCACCAG CCAGGTCCGC AACATCGCGC AGGTGACCAC GGCGGTGGCG
CGCGGCGACC TCACCCGCAA GATCGACGTG GACGCGCGCG GCGAGATCCT GGAGCTCAAG
ACCACCATCA ACACGATGGT CGACCAGCTC TCCTCCTTCG CCGACGAGGT CACCCGCGTC
GCGAAGGAGG TCGGCACCGA GGGCAAGCTC GGCGGTCAGG CCGAGGTCGA CGGGGTGTCC
GGCACCTGGC AGAAGCTCAC CGAGAGCGTG AACCAGCTGG CGGGCAACCT GACCACGCAG
GTGCGCGCGA TCGCGGTGGT GGCCACGGCG GTGACCGAGG GCGACCTGAC CAGGCAGGTC
ACCGTCGACG CCTCGGGCGA GGTCGCCGAG CTGAAGGACA ACATCAACCG GATGATCTCC
AACCTCAAGG AGACCACCCG CGCGAACCGC GAGCAGGACT GGCTCAAGAC GAACCTGGCC
CGGTTGTCCG GCCTGATGCA GGGCCACCGG GACCTGGACG CGCTGGCGGG CCTGGTGATG
AGCGAGCTGA CCCCGCTGGT GGGGGCGCAG CACGGCGCGT TCTACCTGGT CGACGAGGAG
TCCGGGGCGC TGGAGCTGAC CGCGACCTAC GGGCGGCGCG CGGGCGGTCG GCCCAAGCGG
TTCCAGCTCG GCGAGGGGCT GGTCGGTCAG GTCGCGGCGG ACCGCAAGAC CGTCGTGGTC
TCGTCCGTGC CGCGCGGCTA CCTGGAGATC GGCTCGGGGT TGGGCGCGGC GACGCCCGCG
AGCATCGTGA TCGTGCCGGT GATGTTCCAG GGCGAGGCGC TGGGCGTGAT CGAGCTGGCC
TCGTTCGGCG AGTTCGGGCA CGGCCACCTG GACCTGCTGG ACCAGCTCAA GGAGAACATC
GGCGTCAACG TGAACACCAT GCAGGCCAAC GCGCGCACGG ACAGCCTGCT GGTGGAGTCG
CAGCGGCTGA CCGAGGAGCT GCGGGCCGGT TCGGTGGAGC TGGAGGACCG GGCGCGGCAG
CTGTCGTCGG CCTCGAAGTA CAAGTCGGAG TTCATGGCGA ACATGTCGCA CGAGCTGCGC
ACGCCGCTGA ACAGCCTGCT GATCCTGGCG AAGCTGCTGA CCGACAACCT GGACGGGAAC
CTCAACCCCA AGCAGGTGGA GTTCGCGCGC ACGATCCACT CCTCCGGAAC GGACCTGCTG
CAGCTGATCG ACGACATCCT GGACCTGACC AAGGTCGAGT CCGGGCACAT GCAGGTGCAG
ACCGACCCGG TGCGGGTGTC GGACGTGGTG GGGTACGTGG AGTCGCTGAC CCTGCCGCTG
GCCGCCGAGA AGGGCCTGGG CTTCGACGTG TCGGTGCAGC CGGACGTGCC GTCCACGCTG
CACACCGACG AGCACCGGCT CCAGCAGATC CTGCGCAACC TGCTGTCCAA CGCGGTGAAG
TTCACCCATG AGGGCGAGAT CCGGCTGCGC ATCCGCACGG CGGGGCCGAG CGTGGCGTTC
GACGTGCAGG ACACCGGCAT CGGCATCCCG GCGGAGAAGC TGTCGGTGAT CTTCGAGGCG
TTCCAGCAGG CCGACGGCAC CACGAGCCGC AAGTACGGCG GGACGGGCCT GGGCCTGTCG
ATCAGCCGGG AGCTGTCGGC GCTGCTGGAG GGCAGGCTGG ACGTGCGCAG CGAGCCCGGC
TTCGGCTCGA CGTTCACGCT CTACCTGCCG CTGGGCGACC AGAGCCTGGT GGACGTGCGG
CCGGAGCCGG AGGCGCTGCC GGAGCTGCTG ACCCCGGTGG ACGAGCCCGC CGAGGCCGTG
GTGGCGCCCG CCGAGCTGCC GCCCGCGCCG ATGCGGTTCC ACGGCGAGAA GGTGCTGATC
GTCGACGACG ACCTGCGCAA CGTGTTCGCG CTGACCAGCG TGCTGGAGCT GCACGGGCTG
CAGGTGATCT ACGCGGACAA CGGGATCACC GGGGTGCGGG CGCTGGAGCA GTACGACGAC
GTGACGCTGG TGCTGATGGA CATCATGATG CCGGAGCTGG ACGGCAACGC GACGATGTCG
GCGATCCGGG CGATGGCCCG CTACGAGGAC CTGCCGGTGA TCGCGGTGAC GGCGAAGGCG
ATGAAGGGCG ACCGGGAGAA GTCGCTGGCC TCGGGGGCGA CGGACTACGT GACCAAGCCG
GTGGACACGG ACCACCTGCT GCGGTTGATC GCGTTCTACC TGGGGTTGGA GCAGGACTGA
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| Protein sequence | MTTARDDTDV TLDRLLAALR EMRDGNFRRR LVVPFGSRFA EVAAVFNEIS ERNQALVGEL
VRVRQSVGQE GRLGERLSPG AGGPGGWAMA TDSVNGLIDD LSAPTTELSR VLAAVARGDL
SQELTVSSRG ELAALVDSFD SMTSTLRTFA GEVTRVAREI GTDGRLGGQA QVPGVAGTWK
DLTDNVNFMS SNLTAQVRDI AQVATAVAQG DLSQKITITV AGEMLELKET MNTMVDQLSS
FADEVTRVAR EVGTDGRLGG QAQVSGVAGT WKDLTDNVNF MAGNLTAQVR NIAQVATAVA
RGDLSQKITV DARGEILELK NTLNTMVDQL SSFADEVTRV AREVGTEGKL GGQAEVEGVS
GTWQKLTESV NSMAGNLTSQ VRNIAQVTTA VAQGDLSQKI DVDARGEILQ LKTTINTMVD
QLSSFAAEVT RVAREVGSDG RLGGQAQVPG VGGTWRDLTD SVNFMAGNLT SQVRNIAGVA
TAVARGDLSQ KITVTARGEI LELKETLNTM VDQLSSFADE VTRVAREVGT DGRLGGQAQV
PGVAGTWRDL TDSVNFMANN LTAQVRSIAQ VTTAVAGGDL SQKITVDARG EILELKSTIN
TMVDQLSSFA DEVTRVAREV GTDGRLGGQA RVPGVAGTWK DLTDNVNVMA DNLSSQVRSI
ALVSTAVAGG DLSKKITVEA KGEIAALADT INRMVDTLSA FADEVTRVAR EVGTDGRLGG
QARVPGVAGT WKDLTENVNF MANNLTSQVR NIAQVTTAVA RGDLTRKIDV DARGEILELK
TTINTMVDQL SSFADEVTRV AKEVGTEGKL GGQAEVDGVS GTWQKLTESV NQLAGNLTTQ
VRAIAVVATA VTEGDLTRQV TVDASGEVAE LKDNINRMIS NLKETTRANR EQDWLKTNLA
RLSGLMQGHR DLDALAGLVM SELTPLVGAQ HGAFYLVDEE SGALELTATY GRRAGGRPKR
FQLGEGLVGQ VAADRKTVVV SSVPRGYLEI GSGLGAATPA SIVIVPVMFQ GEALGVIELA
SFGEFGHGHL DLLDQLKENI GVNVNTMQAN ARTDSLLVES QRLTEELRAG SVELEDRARQ
LSSASKYKSE FMANMSHELR TPLNSLLILA KLLTDNLDGN LNPKQVEFAR TIHSSGTDLL
QLIDDILDLT KVESGHMQVQ TDPVRVSDVV GYVESLTLPL AAEKGLGFDV SVQPDVPSTL
HTDEHRLQQI LRNLLSNAVK FTHEGEIRLR IRTAGPSVAF DVQDTGIGIP AEKLSVIFEA
FQQADGTTSR KYGGTGLGLS ISRELSALLE GRLDVRSEPG FGSTFTLYLP LGDQSLVDVR
PEPEALPELL TPVDEPAEAV VAPAELPPAP MRFHGEKVLI VDDDLRNVFA LTSVLELHGL
QVIYADNGIT GVRALEQYDD VTLVLMDIMM PELDGNATMS AIRAMARYED LPVIAVTAKA
MKGDREKSLA SGATDYVTKP VDTDHLLRLI AFYLGLEQD
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