| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5090 |
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| Symbol | |
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| ID | 8329288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6065558 |
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| End bp | 6067021 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945526 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_003102758 |
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| Protein GI | 256379098 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000290329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGG GGTATTGGCG CGGGGCCGGA CAGGGGCCCG CCGCGGGTGC CGAGGGGGGC
GGTCAGGAGG GCACGGCGGA GGGCTTCACC CCGGAGAGCC TCACCCCGGA GAACTGGCGC
CTGCTCGTCG GCGGGCTCCA CGAGGCCGTC GTCGTGCTGG ACCCGGAAGG CGTGGTGCGC
CTGGCCAACC CCCCGGCCGA GGCGCTGTTC CCGGACGCCC GCGTCGGCGT CGTCGCCGCG
CCCGGAGGGC GGTCGCAGCA GCTCGGGGAC GGGTGGGTCG CGCACTACCG GACGCCCGAG
GACTTGCTCG ACGGGGTGAC CAGGCGGCTC GACGGGGCGG TGGACCGGGA CGACGCGCTG
CGGGCGGTGG TCGAGCTCGC GCCCGCAGGT CACGCGGTCG TGGTGGTGCC GGGGCAGCGC
GGCAGGCTGG AGTGGTGGCG GCGGTCCTCG GGTGGGGACG TGGTGGTGAG CCGGGGGACG
CGGCAGGTCG CCGAGGGCGT GCCGGGGCTG ACGGACGTGC TGGACGGGGT GCGGGAGAGC
GTCGAGCTGG TCGAGCCGGG TGACGCGCCC TGGGCGCTGC AGGCGGGCGC GCCGACCAAG
GCGACCGCCG TGCCGCTCAC GCCCGGCGCC GCGCTGGTGT GCTTCGGGCC GTCGGGTGAC
GCGGAGCTGC TGCGCCGGTT CGCCGAGCGC GCGGCGGCGG CGATCGCGGC GGGGGAGCGG
TTCGGGGAGC AGCGGCGGAC CGTGGACGCG CTGCGCGCGG GGCTGCTGCC GACGCCGCTG
CCGCAGGTCG CGGGGGCGCG GCTGGCGCAG GTGTTCGAGC CCGCGCACCG GGCGACCATG
ATCGGTGGCG ACTTCTACGA CGTGCACCCG AGGGACGACG GGAGCGCGGC GTTCGCGCTG
GGGGACGTGG CGGGCAACGG GGTCGAGGCG GCGGTGCACA GCGGGCGGGT GCGGCAGAGC
CTGCACACGC TGCTGCTGGT CGAGCAGCGG CCCGCGCAGC TGTTGCACTT GTTGAACACG
GCGTTGCGGG CGGCGGGGAG CAGGTTGTTC ACCACGATCG TGGTGGGCAC GTTCGTGCCG
GTGCAGGCCG GGGGGCTGCG GATGACGCTC GCGGCCGGTG GGCACCCGTC GCCGCTGGTG
CTGCGGACGG GTGGGCGGGT GGACGAGATC GCGGTGCGCG GGGGGATCGT GGGGGTGCTG
CCGGAGGTCC GGTTCAGCCA GGCCACGGTG ACGTTGTCGC CGGGGGAGAC GTTGTTGCTG
TACAGCGATG GGGTGACGGA GGCCCGGTCT CGGGGGGATC GGGCGGAGCT GTTCGGGGAC
GAGCGGTTGT CGGAGGCCCT GGCGGGGTGC GCGGGGCTTG GGGCGCAGGA GATCGCGGAG
CGGTTGCGGG GGGTTGTGTT CGAGTGGTTG GGGGATGCGG AGCATGACGA TCTGACGTTG
TTGGTGGTGC AGGCGGAGGG GTGA
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| Protein sequence | MAQGYWRGAG QGPAAGAEGG GQEGTAEGFT PESLTPENWR LLVGGLHEAV VVLDPEGVVR
LANPPAEALF PDARVGVVAA PGGRSQQLGD GWVAHYRTPE DLLDGVTRRL DGAVDRDDAL
RAVVELAPAG HAVVVVPGQR GRLEWWRRSS GGDVVVSRGT RQVAEGVPGL TDVLDGVRES
VELVEPGDAP WALQAGAPTK ATAVPLTPGA ALVCFGPSGD AELLRRFAER AAAAIAAGER
FGEQRRTVDA LRAGLLPTPL PQVAGARLAQ VFEPAHRATM IGGDFYDVHP RDDGSAAFAL
GDVAGNGVEA AVHSGRVRQS LHTLLLVEQR PAQLLHLLNT ALRAAGSRLF TTIVVGTFVP
VQAGGLRMTL AAGGHPSPLV LRTGGRVDEI AVRGGIVGVL PEVRFSQATV TLSPGETLLL
YSDGVTEARS RGDRAELFGD ERLSEALAGC AGLGAQEIAE RLRGVVFEWL GDAEHDDLTL
LVVQAEG
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