| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5072 |
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| Symbol | |
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| ID | 8329270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6048948 |
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| End bp | 6050303 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945508 |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_003102740 |
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| Protein GI | 256379080 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACGA CGAAGTGGAT CGGCACCCTG GCCGTGGCGG CTCTGGCCGC CTTACCGGTG
GTGGGCGCCC CGAGCGCGCC GGCCGCGCCG GGAGGCGGGA CGGCCGAGGC ATCCGCGCCG
CTGCGCGACC TCGCGGCGGC CGAGGGCAAG TACTTCGGCA CCGCCATGAC CGTCGGCGAA
CTGGCCGACC CCGCCTACCG GGACCTCAGC GCGCGCGAGG CCGGTGTGCT CACCGTCGGC
AACGAGCTGA AGTGGGACAC CACCGAACCC GCGCGGGGCA GCTTCGACTT CGGCCCCGGC
GACCAGGTCG TGGCGGGCGG CGTCGCGGCC GGGCAGCTGG TGCGCGGGCA CACGCTCGTG
TGGCACAGCC AGACCCCCGC GTGGGTCAAG GCCCTGGAGC CCGCCGACCT GCAGCAGGCC
ATGGTCGACC ACATCGCCGC CGTCGCGGGC CACTACCGGG GGAAGGTGAT CGCCTGGGAC
GTGGTGAACG AGGCGTTCGC CGAGGACGGG ACCCGGCGGC AGGAGTTCTG GCAGCTCAAG
CTCGGCGACG GCTACATCGC CGACGCCTTC CGCGCCGCCC ACGCCGCCGA CCCGGACGCC
AAGCTCTACT ACAACGACTA CAACATCGAC GGGATCGGCG CGAAGAGCGA CGCGGTGTAC
GAGATGGTGA AGTCCCTCCT GGAGGAGGGC GTGCCGATCC ACGGCGTCGG CCTGCAGGGG
CACCTGATCC TCGGGCAGGT CCCGTCGACC GTGCGGCAGA ACGTCCAGCG GTTCGCCGAC
CTCGGGCTGG AGGTCGCGTT CACCGAGCTG GACGTGCGGA TGGACACCCC GGCGGACGCG
GCGAAGCTCG CCGCGCAGGC CGCGGACTAC TCGGCGGTGG TGTCGGCGTG CGTGGCGGTG
GACGGCTGCG TGGGCGTGAC GACGTGGGGG CTGTCGGACA AGTACTCGTG GATCCCGTCG
GTGTTCCCCG GTCAGGGCGC GGCGCTGCCG TTCGACGAGT CGTTCCGGCC CAAGCCCGCC
TACGACGCGG TGGCCGCCGC GTTCGGCGGG GGTTCGCAGG CGGCGTGCTC GGCGGTGTAC
CGGGTGGTCG GGCAGTGGGG CGGCGGGTTC CAGGGCGAGG TCGTGGTGAC CGCCGGGGCC
GCGGCGCTCA CGGGGTGGAC GGTGACGTGG CCGCTCGGGA GCGGGCAGGC CGTGACGGCG
GCGTGGAACG CGTCCGTGAG CACGGCGGGC GGGGTGGTGA CCGCGCGGAA CGCGTCGTAC
AACGGGTCGG TCGGGGCGGG GCGCAGCACG TCGTTCGGGT TCCTGGCGAG CGGGCCGCAC
GCCACCGCGC CGACGGTCGG CTGCGCGACG GGCTGA
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| Protein sequence | MGTTKWIGTL AVAALAALPV VGAPSAPAAP GGGTAEASAP LRDLAAAEGK YFGTAMTVGE
LADPAYRDLS AREAGVLTVG NELKWDTTEP ARGSFDFGPG DQVVAGGVAA GQLVRGHTLV
WHSQTPAWVK ALEPADLQQA MVDHIAAVAG HYRGKVIAWD VVNEAFAEDG TRRQEFWQLK
LGDGYIADAF RAAHAADPDA KLYYNDYNID GIGAKSDAVY EMVKSLLEEG VPIHGVGLQG
HLILGQVPST VRQNVQRFAD LGLEVAFTEL DVRMDTPADA AKLAAQAADY SAVVSACVAV
DGCVGVTTWG LSDKYSWIPS VFPGQGAALP FDESFRPKPA YDAVAAAFGG GSQAACSAVY
RVVGQWGGGF QGEVVVTAGA AALTGWTVTW PLGSGQAVTA AWNASVSTAG GVVTARNASY
NGSVGAGRST SFGFLASGPH ATAPTVGCAT G
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