Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5044 |
Symbol | |
ID | 8329242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6001996 |
End bp | 6003132 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644945480 |
Product | hypothetical protein |
Protein accession | YP_003102712 |
Protein GI | 256379052 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.438034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCAGCA GACTCCGCGG TGCGGCGGTC GTCGCGGCGG CGGTCCTGGC GGCCTCGGCG ACACCGGCGG TGGCGGCCCC CGCGGGTTTC GAGGTCCTCA GCCCGCTCAC CCCCGGTCGG GACGCGGAAG CGGTGGTGGT CAACGGTTCC GGGGTCGCGC TGGGCTGGGC GGTCCGGGCG GACGGGGCGC GGGTGGTGGT GCGCTGGGCC GGGGGTTCGG TGCGCGAGTT CCCGCCCGTG CCGGTGTCGC GGTCGTTCCC CGTCGGGGTG GACGCGGGCG GCGCGGCGCT GCTGAACGTG CGCGGGACGT GGGTGAACGG CGTTCGCTGG GAGGCCGACG GACGGGTGGT GCGGCTGCCG CAGATCGCGG GCGGCGGGCA GAGCACCGTG GACGCGGTGA ACGGCGCCGG GCTCGCGGTC GGGAACACCA CGGACGGCAG CGGGGTCACG CACGCCGCCA CCTGGGACCC GTCGGGGGCG CTGCGCGTGC TGCCGGGGCT GGGGACGCGG GACAGCCGGG CGACCTCGGT GGACGAGGCC GGGAACGTGT CCGGGGCGGC GCTGGGGGCG GACGGGCGGT ACCACGCGAT GCGCTGGGAC GCGGCGGGCG CGCCCACCGA CCTCGGGGTG ACCAGCCAGG ACTACCTGCG CACGGCCGGG ATCGACGGCG AGCACGTGGT GGCAGGCCAC CGGGACGCGG AGTTCGTCCC GAGGGCCTTC CGGTGGGGCG CGGGCGGTCC GGCCGTGGAG CTGCGGACCG GGCCGGGCTG GACGGCGGCC GAGGTGGTCG ACGTGGACGC GTCGGGCAGG TCGGTGGGCA GCTGGGCGGA GGACCAGGGC GAGGCGTCCG TGCCGGTGAC GTGGTCCCCG GACGGGACGC CGCACGAGCT GCCGCTGCCG TCCGGGCAGG TGAACGGCTC GGTGGTCGGG CTGGACGGGA TCGGCGGGGC GTTCGGGCAG GCGGGCGCGG GGACGAGCGG GTTCGCGGTG CGCTGGGATT CGTCGGGCGG CGTGACGCCG CTGCCGGCGC CGCCGGGCAC GACGGGGTCG GTCGCGTCGG GGGCGGGCGG GAACGGGATC GTGGTCGGGC ACGTCGTGGG GGCAGCGGGC AAGCGGGCCG TGCGGTGGAC CCCGTGA
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Protein sequence | MSSRLRGAAV VAAAVLAASA TPAVAAPAGF EVLSPLTPGR DAEAVVVNGS GVALGWAVRA DGARVVVRWA GGSVREFPPV PVSRSFPVGV DAGGAALLNV RGTWVNGVRW EADGRVVRLP QIAGGGQSTV DAVNGAGLAV GNTTDGSGVT HAATWDPSGA LRVLPGLGTR DSRATSVDEA GNVSGAALGA DGRYHAMRWD AAGAPTDLGV TSQDYLRTAG IDGEHVVAGH RDAEFVPRAF RWGAGGPAVE LRTGPGWTAA EVVDVDASGR SVGSWAEDQG EASVPVTWSP DGTPHELPLP SGQVNGSVVG LDGIGGAFGQ AGAGTSGFAV RWDSSGGVTP LPAPPGTTGS VASGAGGNGI VVGHVVGAAG KRAVRWTP
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