Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5033 |
Symbol | |
ID | 8329231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5991988 |
End bp | 5993157 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644945469 |
Product | response regulator receiver modulated serine phosphatase |
Protein accession | YP_003102701 |
Protein GI | 256379041 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.185229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCGG TCGACCGCAT CAGCGTGCTT CTCGTCGAGG ACGACGAGGG CGACGCCATC CTGGTCGAAG CACTTCTGGA GGAGGTGGGG GCGGACGTCG AGCTGCTGCG CGCGCGCACG TTGCGCGAGG CCATGACGCA GCTGTCCGGC GCGGACTGCG TCCTGCTCGA CCTCGGACTC CCCGACACCA CCGGCCTTGA CGGGCTGCTG AACCTGCTGG CCCAGTCCGC GCCCGCCGCC ATCATCGTGC TGACCGGGCT CAACGACGAG CACCAGGGGA TGCGCGCGGT CGCCGCGGGC GCCGAGGACT ACCTCGTCAA GGGGCAGGTC GACGGCGCGG CGCTGCTGCG CGGCATCCGG TACGCGGTGG GCCGCAAGCA GGCCGAGGAG ACCCAGCGGC AGCTGCGGGA CGAGAAGCTG CACGCGGCCG AGAAGACCCG CCTGGAGCGC GGCCTGCTGC CGTCGCCGCT GCTGCGCGGA CCGGCGCCGC TGGTGAAGGA GCGGTACCGG CCAGGCGGCA GCCGGATGCT GCTGGGCGGC GACTTCTACG ACACCGTGCA GGCGCACGAC GGCACCCTGC ACGTGATCAT CGGCGACGTG TGCGGCCACG GGCCGGACGA GGCCGCGCTG GGCGTGCTGC TGCGGATAGC GTGGCGCGCG CTGCTGCTGG CCGAGCAGAC CCCCGAGCGG GTGCTGCACA CGATGCACGA GCTGCTGGAG CTGGAGCGGC ACCAGCCGGG GCTGTTCACC ACCGCGTGCA TGATCTCGGT GGCCCCCGAC CGGCGGTCCG CGCGGGTGTT CCTGGCCGGG CACCCCGAGC CGATCCTGAT GGCGGACGAC AAGATCGTCG AGCTGCCCAG GACGCGCGCG GGGCTGCCGC TGGGCGTGCT GCCGGACAGC GAGTGGGACG CGCTGGACGT CGAGCTGCCG CCCGGCTGGT CGTTGATGAT CTACACCGAC GGCCTCGTGG AGGGCCGGGT GGGCAACGAC TCGGAGCGGC TCGGCTCGGA GCGGCTGATC GAGCTGATCG GGCAGGTCCG CGCGGGGGCG CGGGGCGGGA CGATCGACCC CGACGAGCTC CTGGACTCGC TGATCTCGCG GGTTAAGGAG CTGAACGGCG GGGAACTGGA CGACGACATG GCCGTGCTGT TGATATCGGA GCAGAGCTGA
|
Protein sequence | MSAVDRISVL LVEDDEGDAI LVEALLEEVG ADVELLRART LREAMTQLSG ADCVLLDLGL PDTTGLDGLL NLLAQSAPAA IIVLTGLNDE HQGMRAVAAG AEDYLVKGQV DGAALLRGIR YAVGRKQAEE TQRQLRDEKL HAAEKTRLER GLLPSPLLRG PAPLVKERYR PGGSRMLLGG DFYDTVQAHD GTLHVIIGDV CGHGPDEAAL GVLLRIAWRA LLLAEQTPER VLHTMHELLE LERHQPGLFT TACMISVAPD RRSARVFLAG HPEPILMADD KIVELPRTRA GLPLGVLPDS EWDALDVELP PGWSLMIYTD GLVEGRVGND SERLGSERLI ELIGQVRAGA RGGTIDPDEL LDSLISRVKE LNGGELDDDM AVLLISEQS
|
| |