| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5029 |
|---|
| Symbol | |
|---|
| ID | 8329227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5989207 |
|---|
| End bp | 5989683 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644945465 |
|---|
| Product | protein of unknown function DUF1232 |
|---|
| Protein accession | YP_003102697 |
|---|
| Protein GI | 256379037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCCCG TGATCCTCTT CGGCGGACTC CTGGTCCTGC TCGGCGCGTC CACGCTGATC
TGGCGCGACG CCGACATCGT CGGCCTCTCC CCCGACGCCT CCGGCGGCCT GCTGCTGGCG
CTCGGCGCCG CCGCGATCGT CGCGGGCTTC GTGCTGCGGG CCCGCCGCCG CGCCCGGCGG
ATCGCGAACG GCGAGCCGGA ACCGCTGGGC TCGGTGGTCG ACCGGGCCAG GGCGGTGCCC
CGGATGCTGC GCGACCGCAA GGCGTACGGC ATCGGCGGCG GTCAGCTCGC GGCGTGGGCG
TTCGCGCTGG TGTACGTCGT GTCCCCGGTC GACCTGCTGC CCGAGCTGCT GCCGATCATC
GGCGTGACCG ACGACGCGGG CGTGGGCGTG TGGCTGCTCA CGAGCCTGTC GGCGGCGGCG
GGCGGCTACC TGCGGTGGGA GTCAGAAAAG CGCAACGGCC AGCCCCAGCG CGGCTAG
|
|---|
| Protein sequence | MGPVILFGGL LVLLGASTLI WRDADIVGLS PDASGGLLLA LGAAAIVAGF VLRARRRARR
IANGEPEPLG SVVDRARAVP RMLRDRKAYG IGGGQLAAWA FALVYVVSPV DLLPELLPII
GVTDDAGVGV WLLTSLSAAA GGYLRWESEK RNGQPQRG
|
|---|
| |