Gene Amir_5023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5023 
Symbol 
ID8329221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5983891 
End bp5984628 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content73% 
IMG OID644945460 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003102692 
Protein GI256379032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTCGC TGCCGAACCA CGTCGACGTC GCGGCGTACG TCCTCGGCAT CCTCGACGAG 
GACGAGGTCG ACGCCTTCGA GAACCACCTC GCCCAGTGCC GCCGGTGCGC GCTCGACCTG 
CGCGACTTCG CGCAACTGCC CGACCTGCTC GACGAGGCGA ACGCCGCGGG GCTGCTCAGC 
TCCGACGCGG ACGAGCGCCC GGACGGCCGC TCGGTGCGCT CGATGCTCGA CGTGGTTTCC 
CTGGACCGCG CCCGCAAGCG CCGCAAGTAC TCGCTCTACG CGGCGGCTGC CGCGCTGGTG 
CTGATCGCGC TGTCCTCGGC GGCGACCTAC GGGGTCGTCT CGTCCGGGGG CCTCGTCGCG 
CAGGACGACG GCTCGCCCCG GCAGACCGAG GTGGCGAGGA ACAGCGTCGA CGCCTCGGGC 
GAGCTGGTGC GCACCAACGC CGAGACCGGT GTCTGGGCGC GGATCAGCGC CTCGCCCGAG 
CCGTGGGGGA CCTCGCTGGA GTTCGAGGTC AAGGGCGTCA GGGCGAAGAC CGGCGAGCTG 
GTCGCGAAGT CGCGCGACGG GAAGACCTAC CCCGTCGCCA CCTGGCTCGT CACCGCCGAC 
GACGCCGAGG GCGCCCGGAC CGGCGAGGCC GTCACGATCC CCGGCGGGCT CGCGCTGCGG 
TGGCACGAGA TCACGGAGTT CGCGGTGCGG GACAAGGACA GCGGCGAGGT CCTCCTGCTG 
CTGCCGACCT CGGACTGA
 
Protein sequence
MSSLPNHVDV AAYVLGILDE DEVDAFENHL AQCRRCALDL RDFAQLPDLL DEANAAGLLS 
SDADERPDGR SVRSMLDVVS LDRARKRRKY SLYAAAAALV LIALSSAATY GVVSSGGLVA 
QDDGSPRQTE VARNSVDASG ELVRTNAETG VWARISASPE PWGTSLEFEV KGVRAKTGEL 
VAKSRDGKTY PVATWLVTAD DAEGARTGEA VTIPGGLALR WHEITEFAVR DKDSGEVLLL 
LPTSD