| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5019 |
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| Symbol | |
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| ID | 8329217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5979577 |
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| End bp | 5980500 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945456 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_003102688 |
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| Protein GI | 256379028 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.276096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTCC CACTCGTGCT GCTCGCCTCG CCCCGGTCGT TCTGCGCCGG GGTCGAGCGG
GCGGTGGAGA TCGTCGAGGA GCTGCTGCGG CGGCGCGGCG GCCCGGTCCA CGTGCGCAAG
CAGATCGTGC ACAACACGCA CGTGGTGGCG CGGCTGGAGT CGATGGGCGC GGTGTTCGTG
GACGAGCTGG ACGAGGTGCC GGACGGGGCC GTGGTGGTGT TCTCCGCGCA CGGGGTGTCG
CCCGCCGTGC GCGCCGAGGC CGAGCGGCGC GGGTTCGAGG TGGTCGACGC GACCTGCCCG
CTGGTGACCA AGGTGCACGC GGAGGCGCGC CGGTTCGCCG GGCGCGGGGA CACCGTGGTG
CTGATCGGGC ACGCCGGGCA CGAGGAGGTC GAGGGCACGC TCGGCGAGGC CCCGGACCGG
ATGCTGCTGG TGGACGGCCC GGAGGCGGTG GCGGCGCTGG AGGTCGAGGA CCCGGAGCGG
GTGTCGTACC TGATGCAGAC GACGCTGGCC GCGGACGAGG CGACCGAGGT CGTGGCGGCG
CTGCGCAAGC GCTTCCCCGC ACTGCGCGGC CCCTCTTCGG ACGACATCTG CTACGCCACC
ACGAACCGCC AAGAGGCGGT ACGGGAGGTG GCGCGCGAGG CCGATCTGGT CCTCGTGGTC
GGTTCAGCGA ACTCATCCAA CTCGGCAAGG CTGGTGGAAC TGGTGCGCCG CGAGGGCGTG
CCCGCCCACC TGATCGACGA CGTGCGCGAC CTGCGCCCGC GATGGCTGGA GGGGGTGCGC
GTGGTGGGGT TGAGCGCGGG GGCGTCCGCG CCGCCGGGGC TGGTGGACGA GGTCGTGGCG
GTGCTGGACG CGCACCGGGT CGAGGTGCGG GAGACCACCG TGGAGACCAT CCGGTTCACC
CTGCCCGCCG CGGTGCGGAG GTGA
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| Protein sequence | MGVPLVLLAS PRSFCAGVER AVEIVEELLR RRGGPVHVRK QIVHNTHVVA RLESMGAVFV
DELDEVPDGA VVVFSAHGVS PAVRAEAERR GFEVVDATCP LVTKVHAEAR RFAGRGDTVV
LIGHAGHEEV EGTLGEAPDR MLLVDGPEAV AALEVEDPER VSYLMQTTLA ADEATEVVAA
LRKRFPALRG PSSDDICYAT TNRQEAVREV AREADLVLVV GSANSSNSAR LVELVRREGV
PAHLIDDVRD LRPRWLEGVR VVGLSAGASA PPGLVDEVVA VLDAHRVEVR ETTVETIRFT
LPAAVRR
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