| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5018 |
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| Symbol | |
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| ID | 8329216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5978465 |
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| End bp | 5979505 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945455 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_003102687 |
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| Protein GI | 256379027 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.61988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC TCGACGTCTC CCCCGCGCAG CGCTCCGCGC GGGACGTGCT GGCCTGGGGC
CGGGCGCTGG TGGACCCGGC GCTGCGCGCC GCCGTCGACC GGCTGCCCGA GTCGATGCGC
TCCATCGCGG GCTACCACTT CGGCTGGTGG GACGAGCACG GCGTCCCCAC CGGCGCGGAC
GCGGGCAAGG CGATCCGGCC GGTGCTCGTG CTGCTGGCCG CGCGCGCGGT CGGCGGGCGG
GCCGAGGACG CGCTGCCCGC CGCGGTCGCG GTGGAGCTGG TGCACAACTT CTCGCTGCTG
CACGACGACG TGATGGACGG CGACGCCACC CGCAGGCACC GGCCGACCGC GTGGGCGGTG
TTCGGGGTCA ACGCGGCGGT GCTCGCGGGC GACGCGCTGA TGACGCTGGC GCTGGACGTG
CTGGCCGGGA GCGGGCACCC GGCGGCGGCG CGGGGCATCG TGCTGCTGAG CGCGGCCGTG
CAGGAGCTGC TCGACGGGCA GAGCTCGGAC CTCGGGTTCG AGGAGCGCGA CGAGGTCGGC
GTCGCCGAGT GCGTGCGCAT GGCCGAGGGC AAGACTGCGG CGCTGCTGGG CGCGTGCTGC
TCGCTGGGCG CCCTGTTCGG CGGCGGCTCC GCCGACCAGG TGGGCGAGCT GGGGCTGTTC
GGCGAGCGGA CGGGCCTGGC GTTCCAGTTC GTGGACGACC TGCTGGGCAT CTGGGGCGAC
CCGGCCGCCA CCGGCAAGCC GGTGCACTCG GACCTGCGCA ACCGCAAGAA GTCGCTGCCC
GTGGTGGCCG CGCTGGCCTC GCGCAGCCAG GCCGGGCGCG AGCTGGCCGG GCTGTACCGG
GGGCGCGGCG AGCTGGCCGG GTCGGCGCTG GAGGAGGCGG CCGGGCTGGT CGAGCAGGCC
GGGGCGCGGG CGTGGGGCCA GCGGCGGGCC GACGAGCTGC TCGCGCAGGC CAGGACGCAC
CTGCGGGCGG CGGGCGTCGA CCCGGTCGCG GCGCGCGAGC TGGACGCCGT CGCCGTGCTG
ATGACCCGAC GCGACCGCTG A
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| Protein sequence | MTDLDVSPAQ RSARDVLAWG RALVDPALRA AVDRLPESMR SIAGYHFGWW DEHGVPTGAD
AGKAIRPVLV LLAARAVGGR AEDALPAAVA VELVHNFSLL HDDVMDGDAT RRHRPTAWAV
FGVNAAVLAG DALMTLALDV LAGSGHPAAA RGIVLLSAAV QELLDGQSSD LGFEERDEVG
VAECVRMAEG KTAALLGACC SLGALFGGGS ADQVGELGLF GERTGLAFQF VDDLLGIWGD
PAATGKPVHS DLRNRKKSLP VVAALASRSQ AGRELAGLYR GRGELAGSAL EEAAGLVEQA
GARAWGQRRA DELLAQARTH LRAAGVDPVA ARELDAVAVL MTRRDR
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