Gene Amir_5004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5004 
Symbol 
ID8329202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5962605 
End bp5963093 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID644945441 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003102673 
Protein GI256379013 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.38701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACC GCATGACGCC CAGCGCTGGA CGAACGGCAC CGCTCGACGC GACGGACCGC 
CGGATCGTGG CCGAGCTGCG CGCGGACGGC AGGCTGTCGA TGCGGTCGCT GGCCGAGCGG 
CTGCACATCT CGCGGGCGAG CGCGTACTCG CGGGTGGAGC GGCTGCACCG GGACGGGGTG 
ATCACCGGGT ACGCGGCGGT GGTCGACCCG GAGCGGTGCG GGATGGGGAT CTCCGCGTAC 
GTGTACCTGA AGATCAGCCA GCACTCGTGG AAGGCGGTGC GGCGGCGGGT GCTGGAGATC 
CCCGAGGTGT GGCAGGGGTC GCTGGTGTCC GGGGACTACG ACCTGGTGCT GCTGGTGCGC 
ACGCCGGACG CGCAGAGCCT GCGGGACCTG GTGCTGAACC GGTTGCAGAC GATGCCGGAC 
GTGACGTCCA GCCACACCGT GCTGATCCTG GACGAGCTGC CGTCGCCGGG GCGCGAACCG 
GAGCTGTGA
 
Protein sequence
MFDRMTPSAG RTAPLDATDR RIVAELRADG RLSMRSLAER LHISRASAYS RVERLHRDGV 
ITGYAAVVDP ERCGMGISAY VYLKISQHSW KAVRRRVLEI PEVWQGSLVS GDYDLVLLVR 
TPDAQSLRDL VLNRLQTMPD VTSSHTVLIL DELPSPGREP EL