| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5003 |
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| Symbol | |
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| ID | 8329201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5961381 |
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| End bp | 5962493 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945440 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
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| Protein accession | YP_003102672 |
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| Protein GI | 256379012 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.25658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACAG CCACACCGGA CCGGACCCTG CTCCCCACCG AGGAACCGCT GGCGCTGCTG
CGTCCCGACG GGTCCGCGGT CGAGGGCTCA CCGCTTCGGA TGCCCGACGA CGAGGTGCTG
CTGGAGCTGC ACCGCCGCAT GGTCGTCGGC CGCCGCTTCG ACACCCAGGC CACCGCGCTC
ACCCGCCAGG GCCGCCTCGC CGTCTACCCG TCCTCGCGCG GCCAGGAGGC GTGCCAGGTC
GGCGCGGTCC TGGCGATGCG CGAGCGCGAC TGGCTGTTCC CCACCTACCG CGACAGCGTC
GCCCTGGTCA CCAGGGGTGT GCCCGCCGCG GGCGCGCTGA CCCTGCTGCG CGGCGACTGG
CACCTCGGCT ACGACCCGCG CGAGCACCGC GTCGGACCGC AGTGCACGCC GCTGGCGACC
AACACCCCGC ACGCCGTCGG CTTCGCGCAC GCCGCCCGCT ACAAGGGCGA GGACACCGCC
GCGCTGGTGC TGCTCGGCGA CGGCGCGACC AGCGAGGGCG ACACGCACGA GGCGCTGAAC
TTCGCCGGGG TGTGGAAGGC GCCGGTGGTG TTCCTGGTGC AGAACAACGG CTACGCGATC
AGCGTGCCGC TGAGCAAGCA GACCGCCGCG CCCACGTTGG CGCACAAGGG GATCGGGTAC
GGCATCCGGT CGGTCCTGGT GGACGGCAAC GACGCGGCGG CGGTCCACGC GGTGGTGTCG
GAGGCGCTGG CGTCCGGTGA GCCGGTGCTC GTGGAAGCGC TTACCTACCG CATCGAGGCG
CACACCAACG CCGACGACGC GTCCCGCTAC CGGGACTCCG CCGAGGTCGC GCACTGGCTG
GCCCGCGACC CCGTCGACCG GCTCGCCTCG CACCTGGCCT CGCGCGGGCT GCTCGACCCG
GCGCGCCGAG ACTCGGTGGA CGCCGAGGCG GAGGAGTTCG CGGCGGCGCT GCGGGCCGAG
CTGAACGCGG ACGCGCGCGT GGACCCGGCG GACCTGTTCC GGCACGTGTA CGCCGAGCCG
ACCGCGCAGC TGCGCGAGCA GGCCGCGATG CTGGCGCGCG AACTGGACGC CGAGCACTCG
GGCGCCGACG ACCTGGACGG GGGACGGGCA TGA
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| Protein sequence | MATATPDRTL LPTEEPLALL RPDGSAVEGS PLRMPDDEVL LELHRRMVVG RRFDTQATAL
TRQGRLAVYP SSRGQEACQV GAVLAMRERD WLFPTYRDSV ALVTRGVPAA GALTLLRGDW
HLGYDPREHR VGPQCTPLAT NTPHAVGFAH AARYKGEDTA ALVLLGDGAT SEGDTHEALN
FAGVWKAPVV FLVQNNGYAI SVPLSKQTAA PTLAHKGIGY GIRSVLVDGN DAAAVHAVVS
EALASGEPVL VEALTYRIEA HTNADDASRY RDSAEVAHWL ARDPVDRLAS HLASRGLLDP
ARRDSVDAEA EEFAAALRAE LNADARVDPA DLFRHVYAEP TAQLREQAAM LARELDAEHS
GADDLDGGRA
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