Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5002 |
Symbol | |
ID | 8329200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5960329 |
End bp | 5961306 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945439 |
Product | Transketolase central region |
Protein accession | YP_003102671 |
Protein GI | 256379011 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00992852 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCG CGCTCAACCG GGCGCTGGCC GACGCGCTGT CCGCCGACGA GCGCGTGCTG GTGTTCGGCG AGGACGTCGG GCCGCTGGGC GGGGTGTTCC GGGTGACCGA CGGGCTGGCC GAGCGGTTCG GCGAGCGCCG CGTGTTCGAC ACCCCGCTCG CCGAGGCGGG CATCCTCGGC ACCGCCATCG GCATGGCCAT GAACGGGCTG CGGCCGGTGG TGGAGATGCA GTTCGACGCG TTCGCCTACC CGGCGTTCGA GCAGATCACC AGCCACCTGG CCAAGTTGCG CAACCGCACG GCGGGCGCGC TGTCGCTGCC CGTGGTGGTG CGCATCCCGT ACGGCGGCGG CATCGGCGGC GTCGAGCACC ACTGCGACTC GTCCGAGGCG TACTACACGC ACACGCCGGG GCTGCGCGTG GTCACGCCGG GCACGCCCGA CGACGCGTAC CGGCTGCTGC GCGACGCGAT CGACAGCCCG GACCCGGTGG TGTTCCTGGA GCCCAAGCGC CGCTACTGGT CCAAGGGCGG GCTGGCGGCG GGCGGACCGG CGTTCGACCG GGCGCTCGTG CGGCGGCCCG GCCGGGACGT GACCCTGATC GCGTACGGTC CGATGGTGCT GACCGCGCTG GAGACCGCCG AGGCCGCCCG CGCCGAGGGC TGGGACGTGG AGGTCGTCGA CCTGCGCACG CTGGCGCCGT TCGACGACGA GACGGTGTGC GCGTCGGTGC GCCGCACCGG GCGGGCCGTG GTGGTGCACG AGGCGTCCGG GTTCGGCGGG TACGGCGCGG AGGTCGTGGC GCGGGTGACC GAGCGGTGCT TCCACCACCT GCACGCGCCG GTGCTGCGGG TGACCGGCTT CGACATCCCG TACCCGCCGC CGATGCTGGA GGAGCACCAC CTGCCCGGCG TGGACCGCAT CCTGGACACC ATCGGCGCGC TGCAGTGGGA CGACCGGGTG GAGGTGCGCG GTGCCTGA
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Protein sequence | MAAALNRALA DALSADERVL VFGEDVGPLG GVFRVTDGLA ERFGERRVFD TPLAEAGILG TAIGMAMNGL RPVVEMQFDA FAYPAFEQIT SHLAKLRNRT AGALSLPVVV RIPYGGGIGG VEHHCDSSEA YYTHTPGLRV VTPGTPDDAY RLLRDAIDSP DPVVFLEPKR RYWSKGGLAA GGPAFDRALV RRPGRDVTLI AYGPMVLTAL ETAEAARAEG WDVEVVDLRT LAPFDDETVC ASVRRTGRAV VVHEASGFGG YGAEVVARVT ERCFHHLHAP VLRVTGFDIP YPPPMLEEHH LPGVDRILDT IGALQWDDRV EVRGA
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