Gene Amir_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5000 
Symbol 
ID8329198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5958438 
End bp5958995 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content71% 
IMG OID644945437 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003102669 
Protein GI256379009 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.696627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACCCG ACTACCCGAT CAGGACCGAA CGCCTGCTGC TGCGCCCCTT CACCGGGCTG 
GACCTTGAGG CGCTGCACTC GTGGCAGTCG CGCGAGGACG TCGTGCGCTA CCTGTACGGC 
GGGCCGCGCA CGCTGGAGGA CAGCGCCGAC CAGCTGATGA CGAAGGCCGC CGTGCCGTGG 
CCGTCGAAGG CGGGGGAGGA CCTGTCGCTG GCGGTCGAGC TGGACGGCGA GGTCGTCGGC 
GAGGTCGTGC TGAAGTGGCT GAGCGAGGCG AACCGGCAGG GCGAGATCGG CTACGTCCTG 
CACCCCGGCC ACCACGGGCG GGGGATCGCC GTCGAGGCGT CGGAGGTGCT GCTGCGCCTG 
GCCTTCGAGG AGCTGGGGCT GCACCGGGTG GTCGCGCAGT GCGATCCGAG GAACACGGCG 
TCGTGGCGGG TGATGGAGAA GCTGGGGATG CGCAGGGAGG CGCACTTCCG GCACTGCGAG 
GTGTTCAAGG GCGAGTGGGG CGACGTGTAC GTGTACGCGC TGCTGGAGGA CGAGTGGTCG 
GGCTCGTCTG GTACGTGA
 
Protein sequence
MAPDYPIRTE RLLLRPFTGL DLEALHSWQS REDVVRYLYG GPRTLEDSAD QLMTKAAVPW 
PSKAGEDLSL AVELDGEVVG EVVLKWLSEA NRQGEIGYVL HPGHHGRGIA VEASEVLLRL 
AFEELGLHRV VAQCDPRNTA SWRVMEKLGM RREAHFRHCE VFKGEWGDVY VYALLEDEWS 
GSSGT