Gene Amir_4992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4992 
Symbol 
ID8329190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5951838 
End bp5952440 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content76% 
IMG OID644945430 
ProductSNARE associated Golgi protein 
Protein accessionYP_003102662 
Protein GI256379002 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGCTGG ACTTCCTCCG CGACCTTCCG CCCGCCCTCG TGCTGGCGCT CGTCTTCGCC 
CTCCCCGCGC TGGAGGCGTC GACCATGCTC GGCGTCGTCT TCCCCGGTGA GGTCGCCGTG 
CTGGTCGGCG GGGCGGTCGC GCACTCCGGT GGGGCGCCGC TCTGGGCGGT GCTGGTGGCT 
GCGGTCAGCG GGGCGGTCAT CGGGGACGTC ACCGGGTACC TCGTCGGCCG CCGGTACGGG 
CACCGGATGG TCAAGCTGCT GCCCGAGCGG CTGGTCAAGC CCGAGCACCT GGCCAAGGCC 
GAGGAGCTGC TGCGCCGCCG GGGCGGGGTG GCGGTGTTCG TGGGGCGGTT CACGGCGCTG 
CTGCGGGCGC TGGTGCCCGC GCTCGCCGGG ATGAGCCGGG TGCCGATCCG GACGTTCCTG 
CTGTTCAACG CCCTCGGCGG GGTGCTCTGG GCGTCCGGGG TCGCGCTGCT GGGGTACGGG 
GCGGGCGCGA GCCTGCAGCT GGCCGAGCAC CGGCTCGGGC TGGTCGGCGA GATCGTGCTG 
GGCGTGCTGG TGGTGGCGGG CGCGGCGGCG TACCTGTGGC GGCGCAAGGC GCACCGGTCG 
TGA
 
Protein sequence
MVLDFLRDLP PALVLALVFA LPALEASTML GVVFPGEVAV LVGGAVAHSG GAPLWAVLVA 
AVSGAVIGDV TGYLVGRRYG HRMVKLLPER LVKPEHLAKA EELLRRRGGV AVFVGRFTAL 
LRALVPALAG MSRVPIRTFL LFNALGGVLW ASGVALLGYG AGASLQLAEH RLGLVGEIVL 
GVLVVAGAAA YLWRRKAHRS