Gene Amir_4990 details

Gene Information

• Locus tag: Amir_4990
• ID: 8329188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 5950479
• End bp: 5951099
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644945428
• Product: Sua5/YciO/YrdC/YwlC family protein
• Protein accession: YP_003102660
• Protein GI: 256379000
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0009] Putative translation factor (SUA5)
• TIGRFAM ID: [TIGR00057] Sua5/YciO/YrdC/YwlC family protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGGT ACCTCGACGT CCACCCGGTG AACCCCCAGC GGCGCGCCAT CGACCAAGCG 
GTCGAGGTGG TGCGGGCGGG CGGGTTGATC GCCTACCCGA CGGACTCCTG CTACGCGCTC 
GGCTGCCAGC TGGGCAACAA GGAGGGCCTG GACCGGATCA GGCAGATCCG GAACCTGGAC 
GACAAGCACC ACTTCACCCT GGTGTGCCGG GACTTCGCGC AGCTGGGCCA GTTCGCGTAC 
GTGGAGAACG CGGCGTTCCG CGCGATCAAG GCCGCGACGC CGGGCAGCTA CACGTTCATC 
CTGTCGGCGA CCCGCGAGGT GCCGAGGCGG CTGCTGCACC CGAAGAAGAA GACGGTCGGC 
GTGCGCATCC CGGACAACGC GGTGGTGCAG GCCCTGCTGG AGGCGCTGGG CGAGCCGCTG 
CTGTCGAGCA CGCTCCTGCT GCCCGACCAG GAGGAGCCGC TGGTGCAGGG GTGGGAGATC 
AAGGAGCGGC TGGACCACGT GGTGGACGCC GTCCTGGACT CCGGCGACTG CGGCACCGAG 
CCGACGACGG TGGTGGACTT CTCCAGCGGC GAGGCCGAGG TGCTGCGGGT GGGGGCGGGG 
GACCCCAGTC GCTTCGAGTA G 

 

Protein sequence

MARYLDVHPV NPQRRAIDQA VEVVRAGGLI AYPTDSCYAL GCQLGNKEGL DRIRQIRNLD 
DKHHFTLVCR DFAQLGQFAY VENAAFRAIK AATPGSYTFI LSATREVPRR LLHPKKKTVG 
VRIPDNAVVQ ALLEALGEPL LSSTLLLPDQ EEPLVQGWEI KERLDHVVDA VLDSGDCGTE 
PTTVVDFSSG EAEVLRVGAG DPSRFE