Gene Amir_4985 details

Gene Information

• Locus tag: Amir_4985
• ID: 8329183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 5945067
• End bp: 5947130
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644945423
• Product: Tetratricopeptide TPR_4
• Protein accession: YP_003102655
• Protein GI: 256378995

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.688243
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGGCCG GGTACGTGGC GGGCGACATC AACTTCCACC GGGGCGCCGA GCGCTCGCTC 
GAACCGGTCA GGCAGCTGCC TGCGTCACCG CGCTGGCTGG TCGGTCGCGA GACCGCGCTG 
CGCGAGTTCG ACGCCGCCGC CCGACGTGCG GCCGAGAACG GGGAAGTCGC CCTGCTGGTC 
GTCGAGGGTG GACCAGGCAC CGGCAAGACC GCCTTCGCAC TGAACTGGGC GCACCGCAAC 
GCGGACGCCT TCCCGGACGG CCAGCTGTTC GCCGACCTCG GCGGCGGCGG GCCGCTGGGA 
GCTCCCGTGC TGCCGGTGCT CCTGGGATTC CTCGCCGCGC TCGGCGTCGT GCCCTCCGCC 
GCCGCGAAGG GCGACGTCGC CTCGGTGGCC GCGCTCTACC GGGGCGCGAT CGCCGGACGC 
CGGATGGTCG TGGTGCTGGA CAACGCCACC GGCACGGCGC AGGTCGAGCC GCTACTCCCC 
GGTGCCGCGA CCTGCGCCGT GCTTGTCACC AGCCGCAGCA GGCTGTCCGG GTTGCGGATG 
CTCGGCGCGG TCGTCCACCG GCTCGCCCCG CTGGGCAGGT CGGACTCGCT CACGCTGCTG 
GCCCGCTACC TCGGCGACGC GGTGGAGGCC GACCCCGCCT CGGTCGAGGT CTTCCTGGAC 
TGCTGTGCCG GACTGCCACT GGCGCTGGCC ATCGTGGCCG CGCGCGCTGC GGAGAACCCG 
GAGTTCGACC TGTCCGTGCT GGCCGACGAG CTGGGCGACG TGCGACGCAG GCTCGACGCA 
TTGGAGACGG GGGAGTCGGG CGGCGGCCTG CGGGCGGTGC TGTCCTGGTC GTACGAGGCG 
CTCGACGCGC AGACCGCGCG GGCGTTCCGG GCCGTTGGAG CTGTGCCCGC CGAGGAAGTG 
ACCGCCCACG CGCTCGGCTG GACGCTCCGC GCCTCCCCTG GGGACGCGAC CAAGCTGCTG 
CGCGCCCTGG AGGTGCGGAA CCTGCTGTGG CAGCGCACCC CCGGCCGGTA CACCGCGCAC 
GCGCTGCTCA AGCTCTTCGG CTGCGAGCTG AGCGCGTGGG CTGGCGAGGC CGAGGAGGCC 
GCTAGGGGGT GCGTCGACCA CTACGCGCGC ACCGCCCACC GCGCCGACCT CCTGCTGTAC 
CCGCATCGCG CGAGTACCGA CGTCCTGACC CCGGTCGACG AGCCGGAGCC GGTGCCGCTG 
CCCGACGAGG AGGCCGCGCT GCGCTGGTTC GCCGAGGAGC ACTCCCAGCT CCTCACCGCG 
TATGAGACGG CACTGGAACG CCACTGGGAC GAGCACGCCT TCCAGCTCTC CCGCGCCCTC 
GACACCTACC ACCACCGCCG CTCCCGGCTC CGGGAGAACC TGGCCACCGC GTCCGGTGGC 
GCGCTCGCCG CGGACCGCCT CGGACACCTC AAAGGCCGGG TGCTGGCGCA CCGCCAGCTC 
GGGCGCGCCC TGACCAGGGT CGAGCTGCTC GGTGAGGCCC TGGTGGAGCT GGAGGCCACC 
GCGGTGCTGG CCGACCGGCT CGGTGACCCG CTGGAAGCCG CGCACACCCA CCACGACCTG 
GCCAGGGTGC GGGCCAGGCT GGACGACCAG GCGGGCGCGC TGCGCGACGC GGGACGGGCG 
CGGGTGCTGT ACGCGATGGC CGGGCACCTC GCGGGGGAGG GACACGCGCT GAACGCCATG 
GCCAGGTGCC ACGCCGAGCT GGGCGAGCTG GTCGAGGCGC GACGGTGCTG CGAGGCCGCT 
CTGCGGGCGC ACCGGCGCGC GGACAACAAG AGCGGGCGCC TGGTCGCGCT GGACAACCTG 
GGGTTCATCG AGCAGCGGAC GGGACGCGGT GACGCGGCTG TGCGCGCCTA CCAGGACGCG 
CTCGAACTCT GCGCCGAGGG CGAGCACCAC TTCTACGAGG CGGCGATCCT GGAGCACCTG 
GGCCTCGCGC TGGCGGAGCG GGGCGACGCG GAAGGCGCGC GTGCCGCCCT GCGCCGGGCG 
GTGCTGCTCT ACGAGGAGCA GCACCGCCTA GCCGATGCGG ACCGGGCGCG TTCCACCGCT 
CCACCGGGAA CCCCGGTGGA CTAG 

 

Protein sequence

MQAGYVAGDI NFHRGAERSL EPVRQLPASP RWLVGRETAL REFDAAARRA AENGEVALLV 
VEGGPGTGKT AFALNWAHRN ADAFPDGQLF ADLGGGGPLG APVLPVLLGF LAALGVVPSA 
AAKGDVASVA ALYRGAIAGR RMVVVLDNAT GTAQVEPLLP GAATCAVLVT SRSRLSGLRM 
LGAVVHRLAP LGRSDSLTLL ARYLGDAVEA DPASVEVFLD CCAGLPLALA IVAARAAENP 
EFDLSVLADE LGDVRRRLDA LETGESGGGL RAVLSWSYEA LDAQTARAFR AVGAVPAEEV 
TAHALGWTLR ASPGDATKLL RALEVRNLLW QRTPGRYTAH ALLKLFGCEL SAWAGEAEEA 
ARGCVDHYAR TAHRADLLLY PHRASTDVLT PVDEPEPVPL PDEEAALRWF AEEHSQLLTA 
YETALERHWD EHAFQLSRAL DTYHHRRSRL RENLATASGG ALAADRLGHL KGRVLAHRQL 
GRALTRVELL GEALVELEAT AVLADRLGDP LEAAHTHHDL ARVRARLDDQ AGALRDAGRA 
RVLYAMAGHL AGEGHALNAM ARCHAELGEL VEARRCCEAA LRAHRRADNK SGRLVALDNL 
GFIEQRTGRG DAAVRAYQDA LELCAEGEHH FYEAAILEHL GLALAERGDA EGARAALRRA 
VLLYEEQHRL ADADRARSTA PPGTPVD