| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4963 |
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| Symbol | |
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| ID | 8329161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5919904 |
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| End bp | 5922537 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945403 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003102635 |
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| Protein GI | 256378975 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.412113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCA GACACCTGAG CACGGCACTG GTCGCACTAC TCACAGCGGG CCTGTTCACG
GCCGCCGCCG CACCGGCGTC CGCGCACGGG GGAGGCCCCA AGCAGCCGGT CATCGGCGAA
CCGCGCACCG AGCACGGCTG CGCCCGGATC GAGAAGTCGC TGCCCACCCT GGCCACCTGG
CCCAAGGTCA CCAGCCAGGT CAAGTCCACC CCCGCCGACG AGCGCAAGGT GCGCGAGCTC
GTCTCGAAGA TGACGCTGGC CGAGAAGATC GGCCAGATGA CGCAGCCCGA GATCGTCTCG
ATCACGCCCG ACGAGGTGCG CCAGCACAAC ATCGGCTCGG TGCTCAACGG CGGCGGCTCC
TGGCCCAACC GGGACAAGCA CGCCTCCACC GGCGACTGGC TCGCGCTGGC CGACTCGTTC
TGGCAGGCCT CCGTCAGCAC CAGGCTGAAG GTGCCGGTGC TGTGGGGCAT CGACGCCGTG
CACGGCAACA ACAACGTCTA CGGCGCGACC GTCTTCCCGC ACAACATCGG CCTGGGCGCC
GCGCAGGACC CGTGCCTGGT GCGCGACATC GGCGCCGCGA CCGCCGAGCA GATCCGCGCC
ACCGGCCAGG ACTGGGCGTT CGCGCCGACC CTGGCCGTGC CGCGGGACGA CCGCTGGGGC
CGCACCTACG AGGGCTTCTC CGAGGACCCG AGGATCGTCC GCGCCTACGG CTACGAGGCC
ACCAAGGGCC TGCAGGACGA CGCGAAGCGC CGGATCGGCG CGGACGGCGT GATCGCCACC
GCCAAGCACT ACATCGGCGA CGGCGGCACG ACCGGTGGCA AGGACCAGGG CGTCAACCCC
TCGTCCGAGG CCGAGATGAT CAACCTGCAC GGCCAGGGCT ACTACGGCGC GCTCGCCGCG
GGCGCCCAGT CCGTCATGGT GTCGTTCAAC AGCTGGACCA ACGCGGACCT CGGCATCGAC
GAGGGCAAGC TGCACGGCAG CAAGCGCGCG CTGGACGACA TCCTCAAGAA CAAGATGGGC
TTCGACGGCC TCGTCGTGAC GGACTGGAAC GGCATCGGGC AGGTCCCCGG CTGCACCAAC
TCCAGCTGCC CGCAGGCGAT CAACGCGGGC GTCGACGTGG TCATGGTGCC CGCCGACTGG
AAGGCGTTCA TCGCCAACAC CACCGCGCAG GTCGAGTCCG GCGAGATCCC GCAGGCGCGC
ATCGACGACG CGGTGACCCG CATCCTGCGC GTCAAGCTGC GCTCGGGCCT GTTCGACGCG
CCGAAGCCGT CCCAGCGCGA GCACGCGGGC GACAAGGCGT TGCAGCACAA GAACCTCGCC
CGCGAGGCGG TGCGCAAGTC GCAGGTGCTG CTGAAGAACA ACGGCAACGT GCTGCCGCTC
AGCCCGCGCG CCAAGGTCCT GGTGGTCGGC AAGAGCGCCG ACTCGATGCA GAACCAGACC
GGCGGGTGGA CGCTCACCTG GCAGGGCACC AGCAACACGA ACGCCGACTT CCCCAACGGC
ACCACCATCC TGGGCGGCCT CAAGCAGGCG CTCGGCGAGA AGAACGTGGT GTTCAGCGAG
ACCGGCGACG TCGACCCCAA GGGCTTCGAC GCGGTGATCG CGGTCATCGG CGAGACCCCG
TACGCCGAGG GCAACGGCGA CCTGGGCAGG CGCTCGCTGG AGGCGGCGAA GCTCTACCCG
AACGACCTGG CCGTGCTGGA CAAGGTCAGC GGCAAGGGCG CGCCGGTCGT CACGGTCTAC
GTGTCCGGCA GGCCGCTGCA CGTGAACAAG GAGCTGAACC GCTCGGACGC GTTCGTCGCG
GCCTGGCTGC CCGGCACCGA GGGCGGCGGC GTCGCCGACC AGCTGGTGCG CGGCTGGCAC
ACGTTCCCCG GCTTCACCGG GACGCTCTCC TACTCCTGGC CCAAGGGCGC GTGCCAGACG
CCGCTCAACC CCGGCCAGGA GGGCTACGAC CCGCTGTTCA AGCCCGGCTA CGGGCTGAGG
ACGTGGGAGC GCGGCAAGGT CGGCCGCCTG GACGAGACCT CGCCCGAGAC CGGGTGCTCC
GGCGGCGGCG GTGGCGGCAA CGCGACCGAG GACCTGGACG TCTTCGTGCG GCAGGACGTC
GCGCCGTACA AGAGCTTCAT CGGCTCGGCG GAGAACTGGG GCGGCACGGA GATCGGTCCG
GACGCCACGG CCGCGCACGC GGAGATCTCG GTCGTCCCGT CCGACGTCAA CGTGCAGGCG
GACGCGCTGC GCGCGAAGTG GACCGGCGTC GGCCCGGCGC AGGTGTACCT CCAGCAGCAG
GGCGGGGTGA GCGACCTGCG CGGCTACCGG AACACCAACG GGGCGCTCGT GTTCGACGTG
ATCGTGCACC AGAAGCCCGC GGCGCGGACG GTGCTGAGCG CGCACTGCAC GTACCCGTGC
CTCGGCGAGG TGAACGCGAC CGGGGTGTTC ACCTCGTTGA CGGTGGGGGA GAAGGCCACG
GTGAAGGTGC CGGTGACCTG CTTCGAGGCC ACGGGCCTCG ACCTGGAGGG CGTGAACACG
CCGTTCCTGG TCTACACCGA CGGGCAGTTC GAGGCGTCGT TCGCGAACGT GCGGTGGGTG
CCGCAGGCGG GCGCCGACCC GGACGCGAAG ACCTGCGCGG AGCTGAGCGG CTGA
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| Protein sequence | MSRRHLSTAL VALLTAGLFT AAAAPASAHG GGPKQPVIGE PRTEHGCARI EKSLPTLATW
PKVTSQVKST PADERKVREL VSKMTLAEKI GQMTQPEIVS ITPDEVRQHN IGSVLNGGGS
WPNRDKHAST GDWLALADSF WQASVSTRLK VPVLWGIDAV HGNNNVYGAT VFPHNIGLGA
AQDPCLVRDI GAATAEQIRA TGQDWAFAPT LAVPRDDRWG RTYEGFSEDP RIVRAYGYEA
TKGLQDDAKR RIGADGVIAT AKHYIGDGGT TGGKDQGVNP SSEAEMINLH GQGYYGALAA
GAQSVMVSFN SWTNADLGID EGKLHGSKRA LDDILKNKMG FDGLVVTDWN GIGQVPGCTN
SSCPQAINAG VDVVMVPADW KAFIANTTAQ VESGEIPQAR IDDAVTRILR VKLRSGLFDA
PKPSQREHAG DKALQHKNLA REAVRKSQVL LKNNGNVLPL SPRAKVLVVG KSADSMQNQT
GGWTLTWQGT SNTNADFPNG TTILGGLKQA LGEKNVVFSE TGDVDPKGFD AVIAVIGETP
YAEGNGDLGR RSLEAAKLYP NDLAVLDKVS GKGAPVVTVY VSGRPLHVNK ELNRSDAFVA
AWLPGTEGGG VADQLVRGWH TFPGFTGTLS YSWPKGACQT PLNPGQEGYD PLFKPGYGLR
TWERGKVGRL DETSPETGCS GGGGGGNATE DLDVFVRQDV APYKSFIGSA ENWGGTEIGP
DATAAHAEIS VVPSDVNVQA DALRAKWTGV GPAQVYLQQQ GGVSDLRGYR NTNGALVFDV
IVHQKPAART VLSAHCTYPC LGEVNATGVF TSLTVGEKAT VKVPVTCFEA TGLDLEGVNT
PFLVYTDGQF EASFANVRWV PQAGADPDAK TCAELSG
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