Gene Amir_4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4962 
Symbol 
ID8329160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5919163 
End bp5919753 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content77% 
IMG OID644945402 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102634 
Protein GI256378974 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0320648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCAGGG CCAGCCAGGC GCGGGCCGCC GAGCACCGGG CCCAGGTGCT CGACGCGGCC 
AGCCGCGCCA TCCGCGAGCA CGGCGTCGAC CGCTTGCGCG TCCAGCAGGT CATGGCCGAC 
GTCGGCCTCA CCCACGGTGG CTTCTACCGG CACTTCGGCT CCAAGGACGA CCTCGTCGCC 
CTGGCCTTCG CCTCCGCGTT CGAGGAGCGC GCCCAGGCCG TCCGCAGGCT GGTCCGGCGC 
GCCGAGGAGT CCGGTGAGCC CCCGCGCGCC GCCTTCCTCG CCTCCTACCT CTCCACGCGC 
CACCGCGACG CCCCCGACCG GGGCTGCCCC ATCACCGCGC TCGCCTCCGA CAGCGCCCGC 
TCGGCTCCCG GATCGCCGCT GCCCGAGGCG TTCGCCGACG GGCTGCGCCG CACCGCGGAC 
CTGATCGGCG CGCTCGACGG CGCAGGCCGC GAGCGCGCCC TGGTGGACAT CTGCACCGCC 
GTCGGCGCCC TCACCCTCGC CCGCGCCTGC GGTGACGACC CGCTCGCGGA CGAGCTCCTG 
GCGACCGCGC TCGCCCACCT GACCGCCCCG ACCGGAGGAA CCCCAGCGTG A
 
Protein sequence
MPRASQARAA EHRAQVLDAA SRAIREHGVD RLRVQQVMAD VGLTHGGFYR HFGSKDDLVA 
LAFASAFEER AQAVRRLVRR AEESGEPPRA AFLASYLSTR HRDAPDRGCP ITALASDSAR 
SAPGSPLPEA FADGLRRTAD LIGALDGAGR ERALVDICTA VGALTLARAC GDDPLADELL 
ATALAHLTAP TGGTPA