Gene Amir_4956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4956 
Symbol 
ID8329154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5910899 
End bp5911636 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content73% 
IMG OID644945396 
Productglycosyl transferase family 2 
Protein accessionYP_003102628 
Protein GI256378968 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0193051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCAA GCCTGAGCCG CGTCGCGGAC GCGGTTGAGC TTGAGATCGT TGTTCCCGCC 
TTCAACGAGG CGGACCGGTT AGCGGGCTCA CTGAAGCGCG CCGCGGCCTT CCTGGAGACC
CAGCCGTGGA CGTCCCGGCT GGTGGTCGTG GACAACGGCA GTTCCGACGA CAGCGCGGCC
GTGGCCGCGA GCGTGCCGAC CGGGCGGGTC GGCATCGAGG TCATCGGCTG CGCCGAACCC
GGCAAGGGCG CCGCGGTCCG ACGTGGCCTG TCCGCCTGCA CCGCGCCCTA CGCCGGGTTC
TTCGACGCGG ACCTGTCCAC GCCCGTCGAG ACCCTGACCA GGACCATGGC CGAGCTGCGC
GCGGGCGCCG CCGCCGTCAT CGCGTCCAGG CACGCGCCCG GCGCGCGGTT CGTGACCAGG
CAACCGCTGG GCAGACGGGT GGGCGGGCGG GTGTTCCGCA CCCTCACCAG ACCGCTGGTG
CCGTGCGTGC GCGACACCCA GTGCGGCTTC AAGTTCTTCC GCAGGACCGC GCTGGGCGCG
GCGCTGGAGC GGTGCCGGGT GGACGGGTTC GCGTTCGACG TGGAACTGCT GCGGCGGGTG
CGCGCGGCGG GCGGGGAGAT CGTCGAGGTG CCCGTGGACT GGACCGACGA CCGGCGCTCC
ACGTTCCACC CGGTGCGCGA CGGGATCGCC TCCTTCGCGT CCGTGGTCAG CCTCTACCGG
ACGGCGGTGG CGCGATGA
 
Protein sequence
MRSSLSRVAD AVELEIVVPA FNEADRLAGS LKRAAAFLET QPWTSRLVVV DNGSSDDSAA 
VAASVPTGRV GIEVIGCAEP GKGAAVRRGL SACTAPYAGF FDADLSTPVE TLTRTMAELR
AGAAAVIASR HAPGARFVTR QPLGRRVGGR VFRTLTRPLV PCVRDTQCGF KFFRRTALGA
ALERCRVDGF AFDVELLRRV RAAGGEIVEV PVDWTDDRRS TFHPVRDGIA SFASVVSLYR
TAVAR