| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4936 |
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| Symbol | |
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| ID | 8329134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5888249 |
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| End bp | 5889085 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945376 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003102608 |
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| Protein GI | 256378948 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3953] SLT domain proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTCGGC ACAGGAGACC CCAGGGGGAA CCGACCACGC TGGTGTTCCC AGTGGTCGTC
ACCGCCCCCG GCGTCGTTCC CGGAGCGCAC CGCGCCGAGT CCGACAAGGC CCCGCTGGCC
CACCGGGTGT CCGCCGTCGC GATGGCGGTC GGCGTGGTCG CGGGAGCGGG CGGGGCCGCG
GCCTACGCGG TCACCGGCGG CACCTTCAGC CCCAGCGCGG GCGCCATGAA CTTCGGCGGG
TTCGGCGACC CGGACGCCCA GGCGGTCTCG CCCGCGGCGC AGGCGATCAC CGAGGTGCGG
ACCGTCCACT CGGTGGACGT CGGCGGCGAG GCCTCGCGCC TGCTCCAGCA GGAGCAGATG
ACGGCGGCCA TGGCGGTCAA CCAGATCAGC GACGCGGCGG CGAACGACTA CGCGGCGCGG
GTCAAGGCCG AGCAGGAGCG CAAGGAGCGC GAGGCCGAGG CGCGCAAGCC CGCCAAGCAG
CGCGAGGTCG AGGTCTGGAT CAAGGAGGCC ATCAAGGTCC TCCAGGCCAA CGGCACCTCG
ATCGACAACA GCAGCGTGGG CGCGATCTGG ACGGTGATCC AGAAGGAGTC CGGCGGCAAC
GTCAACGCCA TCAACAACTG GGACTCCAAC GCGGTGCGCG GCACCCCGTC GAAGGGCCTG
ATGCAGGTCA TCGACCCGAC GTTCCAGGCG TACAAGCTCG CGGGCTACGA CGACATCTAC
CGCCCGGTGG ACAACATCAT CGCCGGCGTC CGGTACGTGT ACGCCCGCTA CGGCGGCTTC
CACAACCACC CCGGCCTGGT CGGCATCAAC GCCGGAACCG GCTACCAGGG CTACTGA
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| Protein sequence | MARHRRPQGE PTTLVFPVVV TAPGVVPGAH RAESDKAPLA HRVSAVAMAV GVVAGAGGAA
AYAVTGGTFS PSAGAMNFGG FGDPDAQAVS PAAQAITEVR TVHSVDVGGE ASRLLQQEQM
TAAMAVNQIS DAAANDYAAR VKAEQERKER EAEARKPAKQ REVEVWIKEA IKVLQANGTS
IDNSSVGAIW TVIQKESGGN VNAINNWDSN AVRGTPSKGL MQVIDPTFQA YKLAGYDDIY
RPVDNIIAGV RYVYARYGGF HNHPGLVGIN AGTGYQGY
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