| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4929 |
|---|
| Symbol | |
|---|
| ID | 8329127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5879879 |
|---|
| End bp | 5881066 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644945369 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003102601 |
|---|
| Protein GI | 256378941 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.127537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGCG CGGTGGTCGG GCGCGGGGTG GTGCGCGCGG ACGCGCTCGC CAGGCTGCTG
GTGGGGACGC AGTTCGCGTT CAACGTGGGG TTCTACGCGG TGCTCCCGCA CCTGGCGGCG
CACCTGAGCG GCGGGCTGGG GCTGGCCGGG TGGCTGGTCG GCGTGGTGCT GGGGCTGCGG
ACGTTCAGCC AGCAGGGCAT GTTCGTGGTC GGCGGCGCGC TGGCGGACCG GTTCGGGCCG
CGTCCGGCGG TGCTGGTCGG GTGCGCGCTG CGGGTGGTCG GGTTCGGGTG GCTGGCGTTC
GCCTCGGGCA CGGCGTCGGT GATCGGGGCG GTGCTGCTGA TCGGGTTCGC GGCGGCGCTG
TTCTCGCCCG CCGTGGAGTC GGAGGTGGCG CGGCAGGCGC TGGAGCGCGA GCAGCGCACC
GGTGAGCCGA GGACGCGGCT GCTGGGGACG TTCCACGCGG GCGGGCAGGC CGGGGCGCTG
ATCGGCCCGG TGCTCGGGGC TCTGCTGCTG GGGCAGGGGT TCCAGGCGGT GGCCCTGGCG
GGCGCGGCGG TGTTCGTGGT GATCCTGGTC GGGCACTGGT TCCTGATGCC GGGCCGCGAG
CCGGTGAAGC CGCCGCCCCT GACGTTCCGG GGCGTGGCGG GGAACCGGGC GTTCTTGTTG
TTGTGCCTGG CCTACGGCGG GTACCTGGTG ATCTACAACC AGATGTACCT GACGCTCCCG
GCGGAGCTGG AGCGGGCGAC GGGCGGCCAG GCGGCGCTGG GGTGGCTGTT CGCGCTGTCG
TCGGTGCTGG TGGTGGCGCT GCAGGTGCCG CTGTCGAAGT GGGCCGGGCG GGCGCTGACC
CCGGCGTCGG CGCTGCGGTG GGGCCTGGGC GTGCTGGTGG TCGGCTGCGC CCTGCCCGCG
CTGCTGCCCA CGACCGGCCT GACGGGGTCG GTGGTGTTCG TGGTGCTGCT GACCGGCGGC
CAGATGCTGG CGGCCCCGGC GGCGCGCGCG CTCGTGCCGG ACCTGGTGGA CGAGCGGCTG
CTGGGGACGT TCATGGGGGC GATGTCGTCC CTGTCGGGGC TGCTGGTCCT GGCGACCTCG
GCGCCGCTGG GCGCGGTCGC GGAGGCGGGC GGGGCGGCGA TGTGGCTGGG GATGGCGGTG
ATCCCGCTGG TGGGGTTGTT GCTGGTGCCG CGGACTGCTC GGGCTTGA
|
|---|
| Protein sequence | MGRAVVGRGV VRADALARLL VGTQFAFNVG FYAVLPHLAA HLSGGLGLAG WLVGVVLGLR
TFSQQGMFVV GGALADRFGP RPAVLVGCAL RVVGFGWLAF ASGTASVIGA VLLIGFAAAL
FSPAVESEVA RQALEREQRT GEPRTRLLGT FHAGGQAGAL IGPVLGALLL GQGFQAVALA
GAAVFVVILV GHWFLMPGRE PVKPPPLTFR GVAGNRAFLL LCLAYGGYLV IYNQMYLTLP
AELERATGGQ AALGWLFALS SVLVVALQVP LSKWAGRALT PASALRWGLG VLVVGCALPA
LLPTTGLTGS VVFVVLLTGG QMLAAPAARA LVPDLVDERL LGTFMGAMSS LSGLLVLATS
APLGAVAEAG GAAMWLGMAV IPLVGLLLVP RTARA
|
|---|
| |