| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4921 |
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| Symbol | |
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| ID | 8329119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5868394 |
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| End bp | 5870043 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945361 |
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| Product | protein serine phosphatase with GAF(s) sensor(s) |
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| Protein accession | YP_003102593 |
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| Protein GI | 256378933 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.923256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTGG TGGGCGAAGA CCGAGTGGTG AGCAGCACCC ACGTCGACAA CGACACGGCG
TGGCGAAGCG CCCCCTGCCC TGCCCTCCTG GTGGGTCCGG ACGGCATCGT GCTCGGCCTG
AACCAGGCCG CGAGCGCCCT CCTGCCCTCG ATCGCCGAGG GCGGTCGGCT CGACGACGGC
TGGCTGGCCG ACGCGCACCG CCACCACCTC GAACCCGTCG GCGCGAGCGT CGGCGCCGAG
GCGGGCTCCC TGATCACCGG CGACTTCGGC CCCCGCAGCT TCGCCGCGCA CCCGGTCGAC
CACGGCGGCG GCACCGTCGC CTGGTGGCTG GTCGAGGACA CCGAGCGCCG GGACGTCCTG
GCCGAGCTGG CCGTCGAGCG CGAGCGCGCC GCCCTACTGG ACGAGATGTC CTCAGCCTTG
TTCACGTCGC TGAACGTCGA GCGCTGCGCC CGCGTGGCCG TCCGCCTCGC CGCCACGCAC
CTGGCCGACG CCGCCCTGAT CATCTCGCCC GGCGGGCGCG ACTACCCGGT CACCCGCTGC
GCGCGCGGCG AGTCCCCGGC GCACGGGCGC ATCCTGATCG ACCCCGACGA GGTCCCCGGC
CTCGGCGAGG CGCTGCGCGG CTTCCCGCCC GTTCCGTCCC GCTGGATCGA CCCGTCGGCG
GCCCCCGACT GGCTGCTGCC CGACGGCTTC GGCGAGGCGG GCTCCATCCT GGTCACCCCG
CTGCCCGGCC ACGGCGTGCC CGCGGGCGCG CTGATCCTGG TGCGCCGCAC CGCCGTGCGC
GGCTTCAGCC CCGACGAGGA GGCGTTCGCC CGCCTGTTCG CGGCCCGCGC GGGCGTGGCC
ATGTCGGCGG CCCGCATGTT CGCCCAGCAG GCCTCGATCA CCGAGACCCT GATGCGCGAG
CTGCTCCCGC CCACGCTCAC CCACCTCGGC GGCGTCGAGT TCGCGGGCCG CTACCGCCCG
TCCCAGGACA CCGAGCGGGT CGGCGGCGAC TTCTACGACG TGCACGAGGG CGAGGACGGC
GAGTCCCTGG TGGTGCTCGG CGACGTGTGC GGCAAGGGCC TGGAGGCGGC CGTGCTGACC
GGCAAGGTCC GCACCGCCCT GCAGGTCCTG CTGCCCATGG CCGACGACCA CCACCGGATG
CTCACCCTGC TCAACGAGGC GCTGCTCAAC AACGGCAGCA CCCGGTTCGT CACGCTCGTG
CTCGCCTCCG TCACCCGCGA GGGCACCTCG GTGCGGCTGC GCCTGACCAG CGCGGGCCAC
CCGCCGCCGC TGATCGTGCG CGCGGGCGGC GAGGTCGAGG AGGCCGACAC CACCGGCACG
CTCATCGGCG TGCTCCCCGA GATCGAGAGC AGCACCGCCG AGGTCGTCCT CGGCCCCGGC
GAGACGTGCC TGCTCTACAC CGACGGCATC ACCGAGGCCA GGGGCGGTCC CATGGACACC
GCCATGTTCG GCGAGTCCCG GCTGCGCCGC GCGCTCGCCG AGTGCGCCGG GATGCCCGCC
GAGGCCGTGG TGGAGCACGT GCAGATGCTG GCCGCGCACT GGGTGGGCGC CAGCGACCAC
GACGACATGG CCGTGCTGGC GGTCACCGCG CCGCGCGGGC AGCACCTGAC GGCGGTCGGG
GGGCACGGTC CGGGGCGGTT CACGTCATGA
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| Protein sequence | MILVGEDRVV SSTHVDNDTA WRSAPCPALL VGPDGIVLGL NQAASALLPS IAEGGRLDDG
WLADAHRHHL EPVGASVGAE AGSLITGDFG PRSFAAHPVD HGGGTVAWWL VEDTERRDVL
AELAVERERA ALLDEMSSAL FTSLNVERCA RVAVRLAATH LADAALIISP GGRDYPVTRC
ARGESPAHGR ILIDPDEVPG LGEALRGFPP VPSRWIDPSA APDWLLPDGF GEAGSILVTP
LPGHGVPAGA LILVRRTAVR GFSPDEEAFA RLFAARAGVA MSAARMFAQQ ASITETLMRE
LLPPTLTHLG GVEFAGRYRP SQDTERVGGD FYDVHEGEDG ESLVVLGDVC GKGLEAAVLT
GKVRTALQVL LPMADDHHRM LTLLNEALLN NGSTRFVTLV LASVTREGTS VRLRLTSAGH
PPPLIVRAGG EVEEADTTGT LIGVLPEIES STAEVVLGPG ETCLLYTDGI TEARGGPMDT
AMFGESRLRR ALAECAGMPA EAVVEHVQML AAHWVGASDH DDMAVLAVTA PRGQHLTAVG
GHGPGRFTS
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