| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4906 |
|---|
| Symbol | |
|---|
| ID | 8329104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5843892 |
|---|
| End bp | 5844974 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644945346 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003102578 |
|---|
| Protein GI | 256378918 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGA CCGTGACCGT GACCGCGACC GCCGTCGCCG AGACCCGCGT CGTCCGGACC
GGGGCCCCAC GCCCGTCATC AGGCAGGCGC CTCCCCGCCG GCGCGCTCGC GCTGCTCGCC
CTCCTGGTGG GCGCGGTCCT GCTGAGCCTG CTGGTCGGCG GCCGTGGCCT GTCGCCCGCG
CAGGTCTGGG CGGCGCTGCT CGGCGACGGC GACCCGGAGT CCTCGGCGAT CGTGCTGGGC
CAGCGGTTGC CCCGCACGGT CATCGGCCTG CTCGGCGGCT GCGCGCTGGC CGTGGCGGGC
GCGCTGGTGC AGGGCCACAC CCGCAACCCG CTGGCCGACC CCGGACTGCT CGGCGTCACC
TCGGGCGCGT CGCTGGCCGT GGTGCTGGCG ATCTCCCTGC TCGGCCTGAC CACCCCGGAC
GGCTACCTGT GGTTCGCGTT CGCGGGCGCC GCGCTCGGCA CGGTCGTGGT CACCGCGATC
GGCCTGGCCG CCGGACGTCG GCGGGACGCC TCACCCGCGT CGCTCGCGCT CGCCGGTGCG
GCGGTCTCGG CGCTGCTGAG CGCGATCACC GGCGTGCTGC TGCTGCTCGA CGCGGGCGCG
CTCGACGTGC ACCGCTTCTG GACGGTCGGC TCGCTCGCGG GCGGTCGCGG GTTCGACGTG
GTCGCCGCCG CCGGACCCCC GCTGCTGCTG GGCCTGCTGG TGGCGCTCGC CCACGCGCCC
GCGCTCAACA CCCTCGCGCT CGGCGACGAC CTGGCCCGCG CCCTCGGCCG CCGCCTGCTG
CCCGCGCGCC TGGTCGGCCT GCTGGCGGTG ACCCTGCTGG TCGGGTCGGC GACGGCGCTG
GTCGGGTCGC TCGGGTTCGT CGGGCTGGTC GCGCCGCACC TGGTGCGCGG GGTCACCGGG
CCGGACCACC GGGCGCTGCT GCCGGTGTGC GCGGTCGCGG GCGCGGTCCT GGTGCTGCTG
GCGGACGTCC TCGGGCGGGT GGTGATCGCG CCCGCCGAGC TGCCGGTGGG GATCGTGCTC
GGCGTGGCCG GCGGTCCGGC GTTCCTGCTG GTCGTCGTGC GGCACCTGCG GGGCGCGCGG
TGA
|
|---|
| Protein sequence | MTATVTVTAT AVAETRVVRT GAPRPSSGRR LPAGALALLA LLVGAVLLSL LVGGRGLSPA
QVWAALLGDG DPESSAIVLG QRLPRTVIGL LGGCALAVAG ALVQGHTRNP LADPGLLGVT
SGASLAVVLA ISLLGLTTPD GYLWFAFAGA ALGTVVVTAI GLAAGRRRDA SPASLALAGA
AVSALLSAIT GVLLLLDAGA LDVHRFWTVG SLAGGRGFDV VAAAGPPLLL GLLVALAHAP
ALNTLALGDD LARALGRRLL PARLVGLLAV TLLVGSATAL VGSLGFVGLV APHLVRGVTG
PDHRALLPVC AVAGAVLVLL ADVLGRVVIA PAELPVGIVL GVAGGPAFLL VVVRHLRGAR
|
|---|
| |